RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 C8orf33Q9H7E9 229 aaPredicted RBP4.73□□□□□ -1.65
SRP54-211ENST00000556445 ACTR8Q9H981 624 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 S100A14Q9HCY8 104 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 SPAG4Q9NPE6 437 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 ZDHHC4Q9NPG8 344 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 EQTNQ9NQ60 294 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 KLHL1Q9NR64 748 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 HEBP1Q9NRV9 189 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 CNOT2Q9NZN8 540 aaKnown RBP4.73□□□□□ -1.65
SRP54-211ENST00000556445 CCDC167Q9P0B6 97 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 THEGQ9P2T0 379 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 NLKQ9UBE8 527 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 IKZF3Q9UKT9 509 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 ENTPD4Q9Y227 616 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 POMPQ9Y244 141 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 C15orf41Q9Y2V0 281 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 FAM96BQ9Y3D0 163 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 TIMM22Q9Y584 194 aa4.73□□□□□ -1.65
SRP54-211ENST00000556445 ATG2AQ2TAZ0 1938 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 PDE4DIPQ5VU43 2346 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 ATP6AP2A0A1C7CYW4 349 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 OR6C74A6NCV1 312 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MGAT4DA6NG13 374 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MEI4A8MW99 385 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ZNF879B4DU55 563 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 H3BQ06 376 aaPredicted RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 MANBAO00462 879 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 NR5A2O00482 541 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 OR7A17O14581 309 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 DSCR3O14972 297 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 TAPBPO15533 448 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 GMNNO75496 209 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 EEDO75530 441 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 ATP6AP2O75787 350 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 KRT36O76013 467 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MYO1DO94832 1006 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 SERPINA3P01011 423 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 IL6P05231 212 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ALDOCP09972 364 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 VPREB1P12018 145 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ANPEPP15144 967 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 RPA2P15927 270 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ACADSP16219 412 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 GM2AP17900 193 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MATN1P21941 496 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 CPN2P22792 545 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 AZGP1P25311 298 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 P2RY2P41231 377 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 POLR2JP52435 117 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 SUCLG1P53597 346 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 FOXA1P55317 472 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 CLDN2P57739 230 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 PHEXP78562 749 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 IRF8Q02556 426 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 EGR4Q05215 589 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 LIPEQ05469 1076 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 PPP1R8Q12972 351 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 HSPB3Q12988 150 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 RCAN2Q14206 197 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 CST6Q15828 149 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 PHKG1Q16816 387 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 DCST1Q5T197 706 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 CCNYL2Q5T2Q4 361 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 HIST2H2AA3Q6FI13 130 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 KIAA1161Q6NSJ0 714 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 TMEM220Q6QAJ8 160 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 LRRC74BQ6ZQY2 392 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 DCDC5Q6ZRR9 648 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ZFAND4Q86XD8 727 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 GRAMD2AQ8IUY3 354 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MMAAQ8IVH4 418 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 AQP12AQ8IXF9 295 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 SLC22A15Q8IZD6 547 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ADGRF3Q8IZF5 1079 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 RAB42Q8N4Z0 105 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 Q8N9P0 234 aaPredicted RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 MINDY2Q8NBR6 621 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 FAM71CQ8NEG0 241 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 OR52B6Q8NGF0 335 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 SLC26A7Q8TE54 656 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 SETD7Q8WTS6 366 aaKnown RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 UBE2E3Q969T4 207 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 NCLNQ969V3 563 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 SPDL1Q96EA4 605 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 CMTM7Q96FZ5 175 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 SLC41A3Q96GZ6 507 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 MSANTD3Q96H12 275 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ZFYVE19Q96K21 471 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ARL5BQ96KC2 179 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 C3orf30Q96M34 536 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ZNF48Q96MX3 618 aaPredicted RBP4.72□□□□□ -1.65
SRP54-211ENST00000556445 LRFN5Q96NI6 719 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 BBS4Q96RK4 519 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 ACOX2Q99424 681 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 NPAS2Q99743 824 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 SH3GL1Q99961 368 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 P2RY13Q9BPV8 354 aa4.72□□□□□ -1.65
SRP54-211ENST00000556445 TMEM79Q9BSE2 394 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms