RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PLXDC2Q6UX71 529 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 LRRC74BQ6ZQY2 392 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 EIF3MQ7L2H7 374 aaKnown RBP10.38□□□□□ -0.75
SLIRP-205ENST00000556310 P4HA3Q7Z4N8 544 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 FUNDC1Q8IVP5 155 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 DMRTC2Q8IXT2 367 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-205ENST00000556310 ARFGAP2Q8N6H7 521 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 FAM71CQ8NEG0 241 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 POC1BQ8TC44 478 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 GPR119Q8TDV5 335 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 GTF2H4Q92759 462 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 LRRC46Q96FV0 321 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 PINK1Q9BXM7 581 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 LAT2Q9GZY6 243 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 SLC38A1Q9H2H9 487 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 TPT1P8Q9HAU6 139 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 NPHS2Q9NP85 383 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 P2RX2Q9UBL9 471 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 SLC35A3Q9Y2D2 325 aa10.38□□□□□ -0.75
SLIRP-205ENST00000556310 UQCRHLA0A096LP55 91 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 A0A096LPI6 279 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 EEF1E1-BLOC1S5C9J1V9 151 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 ETV2O00321 342 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 NR5A2O00482 541 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 EIF1AYO14602 144 aaKnown RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 EEF1E1O43324 174 aaKnown RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 DNAJA2O60884 412 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 NTN1O95631 604 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 CRHP06850 196 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 CHRM4P08173 479 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 FCGR2AP12318 317 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 PRKCAP17252 672 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 HOXB9P17482 250 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 SSTR2P30874 369 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 PEX19P40855 299 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 SMCPP49901 116 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 EEF1A1P68104 462 aaKnown RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 CHRNEQ04844 493 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 FOXF2Q12947 444 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 SYPL1Q16563 259 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 CTU2Q2VPK5 515 aaKnown RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 HSP90B2PQ58FF3 399 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 SLC25A53Q5H9E4 307 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 EEF1A1P5Q5VTE0 462 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 SLC2A7Q6PXP3 512 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 ESPNLQ6ZVH7 1005 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 ZNF295-AS1Q8N0V1 137 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 GCNT2Q8N0V5 402 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 ANKFN1Q8N957 763 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 RFWD2Q8NHY2 731 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 FNDC9Q8TBE3 224 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 ST8SIA1Q92185 356 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 FIG4Q92562 907 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 RNASE6Q93091 150 aaKnown RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 INTS12Q96CB8 462 aaKnown RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 SPDL1Q96EA4 605 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 C14orf79Q96F83 325 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 AURKBQ96GD4 344 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 ZNF845Q96IR2 970 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 ADGRG7Q96K78 797 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 MRGPRX4Q96LA9 322 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 PAIP1Q9H074 479 aaKnown RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 RABEP2Q9H5N1 569 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 MED4Q9NPJ6 270 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 PAQR5Q9NXK6 330 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 JKAMPQ9P055 326 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 CCDC167Q9P0B6 97 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 FOXD3Q9UJU5 478 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 DCTN4Q9UJW0 460 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 TRIM33Q9UPN9 1127 aa10.37□□□□□ -0.75
SLIRP-205ENST00000556310 ANKRD17O75179 2603 aaKnown RBP10.37□□□□□ -0.75
SLIRP-205ENST00000556310 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 A0A1W2PNV4 684 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 SYT5O00445 386 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 ADAMDEC1O15204 470 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 TNFSF13O75888 250 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 UBTFL6P0CB48 400 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 NR2F1P10589 423 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 ETFAP13804 333 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 PGCP20142 388 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 CAPN3P20807 821 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 RPS4Y1P22090 263 aaKnown RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 UQCRC1P31930 480 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 PGM1P36871 562 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 CRATP43155 626 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 AGFG1P52594 562 aaKnown RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 DLX5P56178 289 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 DSTNP60981 165 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 FADDQ13158 208 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 SELENBP1Q13228 472 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 PON3Q15166 354 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 QPRTQ15274 297 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 TOMM34Q15785 309 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-205ENST00000556310 SGCBQ16585 318 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 AGKQ53H12 422 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 LRIF1Q5T3J3 769 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 CMIPQ8IY22 773 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 OR10D3Q8NH80 312 aa10.36□□□□□ -0.75
SLIRP-205ENST00000556310 OR2V1Q8NHB1 315 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms