RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	FCAMR	Q8WWV6	532 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	FAM3C	Q92520	227 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	OSTF1	Q92882	214 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SLC22A18	Q96BI1	424 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	AGAP4	Q96P64	663 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	DGAT2	Q96PD7	388 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	RPP25	Q9BUL9	199 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	POLDIP3	Q9BY77	421 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	GRHPR	Q9UBQ7	328 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SCP2D1	Q9UJQ7	156 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SNRNP200	O75643	2136 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SCG5	P05408	212 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	GYPB	P06028	91 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	H2AFB2	P0C5Z0	115 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	RPS19	P39019	145 aa	Known RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	RAB28	P51157	221 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	MPEG1	Q2M385	716 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	MEDAG	Q5VYS4	303 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	ARSK	Q6UWY0	536 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	SLC9B2	Q86UD5	537 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	DNAJC5G	Q8N7S2	189 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	SYT4	Q9H2B2	425 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	STUB1	Q9UNE7	303 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	LOC102723532	A0A0G2JNH3	316 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	NPC1	O15118	1278 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	RNF13	O43567	381 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	RP2	O75695	350 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	SEMA4F	O95754	770 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF14	P17017	642 aa	Predicted RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	AKR1C4	P17516	323 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	DDC	P20711	480 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	LIM2	P55344	173 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	PAMR1	Q6UXH9	720 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	LRRC69	Q6ZNQ3	347 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	NRARP	Q7Z6K4	114 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	KIF18B	Q86Y91	864 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	RBM45	Q8IUH3	476 aa	Known RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF611	Q8N823	705 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	SETD7	Q8WTS6	366 aa	Known RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	MYADM	Q96S97	322 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	FTSJ1	Q9UET6	329 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	AK6	Q9Y3D8	172 aa	Known RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	TEX13C	A0A0J9YWL9	993 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF670-ZNF695	F2Z2N8	137 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	CD3G	P09693	182 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	PVR	P15151	417 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	PRKX	P51817	358 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	RIN1	Q13671	783 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	PDE7A	Q13946	482 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	IRF3	Q14653	427 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	POU4F3	Q15319	338 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	MAPK14	Q16539	360 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	CDNF	Q49AH0	187 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	TMEM215	Q68D42	235 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	NRM	Q8IXM6	262 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	PNLDC1	Q8NA58	520 aa	Known RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	ELMOD3	Q96FG2	381 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	OPALIN	Q96PE5	141 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	CTRC	Q99895	268 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	WDR77	Q9BQA1	342 aa	Predicted RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	APOO	Q9BUR5	198 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	NXF2	Q9GZY0	626 aa	Known RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	UBQLN2	Q9UHD9	624 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	MYOF	Q9NZM1	2061 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	NRG2	O14511	850 aa	Predicted RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	SCO2	O43819	266 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	CS	O75390	466 aa	Known RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	GATB	O75879	557 aa	Known RBP	11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	NDUFS1	P28331	727 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	HMGA2	P52926	109 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF91	Q05481	1191 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	KRBOX4	Q5JUW0	171 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	OR52E2	Q8NGJ4	325 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	FANK1	Q8TC84	345 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	SGPP1	Q9BX95	441 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	MEMO1	Q9Y316	297 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	PLXNA4	Q9HCM2	1894 aa		11.49	□□□□□ -0.57
TMPO-212	ENST00000556029	CXorf51A	A0A1B0GTR3	108 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	CSTA	P01040	98 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	ELAVL4	P26378	380 aa	Known RBP	11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	NFATC4	Q14934	902 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	SSX1	Q16384	188 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	LCN10	Q6JVE6	187 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	CCDC190	Q86UF4	302 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	CPO	Q8IVL8	374 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	BEST3	Q8N1M1	668 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	NUP43	Q8NFH3	380 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	TTL	Q8NG68	377 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	EIF5A2	Q9GZV4	153 aa	Known RBP	11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	SNX11	Q9Y5W9	270 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029		H0Y8X5	98 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	SSX4	O60224	188 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	PCBP3	P57721	371 aa	Known RBP	11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	ILK	Q13418	452 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	LAX1	Q8IWV1	398 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	NXPE2	Q96DL1	559 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	MMAB	Q96EY8	250 aa	Predicted RBP	11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	PDXP	Q96GD0	296 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	COQ10A	Q96MF6	247 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF285	Q96NJ3	590 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms