RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ZCCHC3Q9NUD5 404 aaKnown RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 GPC6Q9Y625 555 aaPredicted RBP12.7□□□□□ -0.38
CHMP4BP1-201ENST00000556017 IGHV4-30-2A0A087WSY4 118 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 C9JVG2 144 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 RGS14O43566 566 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 LYZL6O75951 148 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CHRNGP07510 517 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CPA3P15088 417 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PTNP21246 168 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 IGHV1-2P23083 117 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 IL32P24001 234 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 C21orf58P58505 322 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 RAC3P60763 192 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 FAPQ12884 760 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CCDC153Q494R4 210 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PDSS1Q5T2R2 415 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 LIPMQ5VYY2 423 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 HMBOX1Q6NT76 420 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CDC73Q6P1J9 531 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 BHLHA15Q7RTS1 189 aaPredicted RBP12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 C10orf107Q8IVU9 208 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 KISS1RQ969F8 398 aaPredicted RBP12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZNF775Q96BV0 537 aaPredicted RBP12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TRMT61AQ96FX7 289 aaKnown RBP12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 B3GALT5Q9Y2C3 310 aa12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHMP4BP1-201ENST00000556017 UQCRHLA0A096LP55 91 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 A0A1W2PP18 115 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 KIF2AO00139 706 aaPredicted RBP12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SCAMP2O15127 329 aaKnown RBP12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TLX2O43763 284 aaPredicted RBP12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CYTIPO60759 359 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CRCPO75575 148 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PGM3O95394 542 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 HSPA4LO95757 839 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ATP12AP54707 1039 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SUMO3P55854 103 aaPredicted RBP12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 IRX1P78414 480 aaPredicted RBP12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PLAURQ03405 335 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 GALNTL6Q49A17 601 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 XKR7Q5GH72 579 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CFAP157Q5JU67 520 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 DCST2Q5T1A1 773 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OLIG3Q7RTU3 272 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 GSPT2Q8IYD1 628 aaKnown RBP12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ATP6V1C2Q8NEY4 427 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OR10H5Q8NGA6 315 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 NANOS1Q8WY41 292 aaKnown RBP12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 JADE3Q92613 823 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 MRGPRX4Q96LA9 322 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 C3orf30Q96M34 536 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TIGARQ9NQ88 270 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 FIS1Q9Y3D6 152 aa12.68□□□□□ -0.38
CHMP4BP1-201ENST00000556017 E7EQL1 145 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 BCAS1O75363 584 aaPredicted RBP12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 FGF4P08620 206 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 NEFHP12036 1026 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 HPGDP15428 266 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 CCT3P49368 545 aaKnown RBP12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SPOCK1Q08629 439 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SELENBP1Q13228 472 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PTGR1Q14914 329 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 QPRTQ15274 297 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 RIMKLAQ8IXN7 391 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SLC43A2Q8N370 569 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZNF433Q8N7K0 673 aaPredicted RBP12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 MNS1Q8NEH6 495 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OR5W2Q8NH69 310 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ANP32BQ92688 251 aaKnown RBP12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 GTPBP3Q969Y2 492 aaKnown RBP12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ACTRT3Q9BYD9 372 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 QRSL1Q9H0R6 528 aaKnown RBP12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 NGBQ9NPG2 151 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 YAE1D1Q9NRH1 226 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TMED5Q9Y3A6 229 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 DTNAQ9Y4J8 743 aa12.67□□□□□ -0.38
CHMP4BP1-201ENST00000556017 RNF212BA8MTL3 300 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ZNF724A8MTY0 619 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PIP5K1BO14986 540 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 C6orf47O95873 294 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ASMTP46597 345 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 FOXG1P55316 489 aaPredicted RBP12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 RASGEF1BQ0VAM2 473 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SKP2Q13309 424 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 PPA1Q15181 289 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TIMM23BQ5SRD1 257 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 ABLIM2Q6H8Q1 611 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 B3GLCTQ6Y288 498 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 KRTCAP2Q8N6L1 136 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OR5D16Q8NGK9 328 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 TWIST2Q8WVJ9 160 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OR5P2Q8WZ92 322 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 COQ8BQ96D53 544 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 REXO5Q96IC2 774 aaKnown RBP12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SDF2Q99470 211 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 KLHL9Q9P2J3 617 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 SNX8Q9Y5X2 465 aa12.66□□□□□ -0.38
CHMP4BP1-201ENST00000556017 IGKV3D-15A0A087WSY6 115 aa12.65□□□□□ -0.38
CHMP4BP1-201ENST00000556017 OR5H1A6NKK0 313 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms