RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 IL23RQ5VWK5 629 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 ZNF621Q6ZSS3 439 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 TOM1L2Q6ZVM7 507 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 PAQR9Q6ZVX9 377 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 ARCQ7LC44 396 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 CCDC170Q8IYT3 715 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 NEK11Q8NG66 645 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 GDAP1Q8TB36 358 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 TIMD4Q96H15 378 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 SPATA13Q96N96 652 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 KCNA7Q96RP8 456 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 CYP2S1Q96SQ9 504 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 ERVK-6Q9BXR3 956 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 SPNS1Q9H2V7 528 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 PPDPFQ9H3Y8 114 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 SIRT7Q9NRC8 400 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 FAM153AQ9UHL3 310 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 ANGPTL2Q9UKU9 493 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 RFNGQ9Y644 331 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 MROH7-TTC4A0A0A0MT08 1334 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 IGSF9BQ9UPX0 1349 aa1.13□□□□□ -2.23
SRP54-207ENST00000555535 NLRC5Q86WI3 1866 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 A0A0U1RRA0 63 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 A0A1W2PRV1 198 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 TLR4O00206 839 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 BET1O15155 118 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 SS18L1O75177 396 aaPredicted RBP1.12□□□□□ -2.23
SRP54-207ENST00000555535 CXCL14O95715 111 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 GIPP09681 153 aaPredicted RBP1.12□□□□□ -2.23
SRP54-207ENST00000555535 ZCCHC18P0CG32 403 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 HTR5AP47898 357 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 SLC6A8P48029 635 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 SCARB2Q14108 478 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 TFDP1Q14186 410 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 CARTPTQ16568 116 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 RSPO1Q2MKA7 263 aaPredicted RBP1.12□□□□□ -2.23
SRP54-207ENST00000555535 SLC39A12Q504Y0 691 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 C1orf146Q5VVC0 180 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 OR8G2PQ6IF36 304 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 C6orf89Q6UWU4 347 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 GDPD3Q7L5L3 318 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 CCDC91Q7Z6B0 441 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 IQCA1Q86XH1 822 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 MFSD6LQ8IWD5 586 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 LRRC17Q8N6Y2 441 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 LPCAT1Q8NF37 534 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 NPBQ8NG41 125 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 OR8H1Q8NGG4 311 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 OR52P1PQ8NH57 321 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 SELENOMQ8WWX9 145 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 NPAS2Q99743 824 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 FEM1AQ9BSK4 669 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 TBC1D10AQ9BXI6 508 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 GPR61Q9BZJ8 451 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 IFI27L2Q9H2X8 130 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 GPN2Q9H9Y4 310 aaPredicted RBP1.12□□□□□ -2.23
SRP54-207ENST00000555535 ZNF586Q9NXT0 402 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 UTP6Q9NYH9 597 aaKnown RBP1.12□□□□□ -2.23
SRP54-207ENST00000555535 XPO7Q9UIA9 1087 aaKnown RBP1.12□□□□□ -2.23
SRP54-207ENST00000555535 GGA2Q9UJY4 613 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 CARHSP1Q9Y2V2 147 aaKnown RBP1.12□□□□□ -2.23
SRP54-207ENST00000555535 PLLPQ9Y342 182 aa1.12□□□□□ -2.23
SRP54-207ENST00000555535 CABIN1Q9Y6J0 2220 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 IGKV3D-11A0A0A0MRZ8 115 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 TRAV40A0A0B4J280 105 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 A0A1B0GWB2 263 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 H0Y626 953 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 ANGPTL7O43827 346 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 RCBTB2O95199 551 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 CHTF8P0CG12 524 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 TSPY4P0CV99 314 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 TSPY10P0CW01 314 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 BCKDHAP12694 445 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 MUTP22033 750 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 NMUP48645 174 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 NRF1Q16656 503 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 SMU1Q2TAY7 513 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 FAM133BQ5BKY9 247 aaKnown RBP1.11□□□□□ -2.23
SRP54-207ENST00000555535 GLRA4Q5JXX5 417 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 C1QTNF12Q5T7M4 302 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 Q8N976 141 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 SLC5A11Q8WWX8 675 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 SNX21Q969T3 373 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 SLC25A36Q96CQ1 311 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 ZNF560Q96MR9 790 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 OR11A1Q9GZK7 315 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 COMMD4Q9H0A8 199 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 CDC42EP4Q9H3Q1 356 aaKnown RBP1.11□□□□□ -2.23
SRP54-207ENST00000555535 GNPTGQ9UJJ9 305 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 TRAPPC4Q9Y296 219 aa1.11□□□□□ -2.23
SRP54-207ENST00000555535 PLEKHH1Q9ULM0 1364 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 MYO16Q9Y6X6 1858 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.1□□□□□ -2.23
SRP54-207ENST00000555535 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.1□□□□□ -2.23
SRP54-207ENST00000555535 A0A1W2PRQ8 180 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 ESYT2A0FGR8 921 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 RPL36A-HNRNPH2H7BZ11 118 aa1.1□□□□□ -2.23
SRP54-207ENST00000555535 HSF2BPO75031 334 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms