RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TUBGCP2Q9BSJ2 902 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 DPH7Q9BTV6 452 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 RRP15Q9Y3B9 282 aaKnown RBP4.07□□□□□ -1.76
VRK1-205ENST00000555402 RALGAPA1Q6GYQ0 2036 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 HCFC1P51610 2035 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 LRP5LA4QPB2 252 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 PCP4L1A6NKN8 68 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 DHRS7CA6NNS2 312 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 ZNF254O75437 659 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 GPX5O75715 221 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 IL1BP01584 269 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 THY1P04216 161 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 PNMTP11086 282 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 DBTP11182 482 aaKnown RBP4.06□□□□□ -1.76
VRK1-205ENST00000555402 MRPS11P82912 194 aaKnown RBP4.06□□□□□ -1.76
VRK1-205ENST00000555402 NCBP1Q09161 790 aaKnown RBP4.06□□□□□ -1.76
VRK1-205ENST00000555402 ZMYND11Q15326 602 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 TIGITQ495A1 244 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 TP53I3Q53FA7 332 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 PAN3Q58A45 887 aaKnown RBP4.06□□□□□ -1.76
VRK1-205ENST00000555402 WSCD1Q658N2 575 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 ZSCAN25Q6NSZ9 544 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 TPRA1Q86W33 373 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 GPR65Q8IYL9 337 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 CLEC4FQ8N1N0 589 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 KIR3DL3Q8N743 410 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 GTSF1Q8WW33 167 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 PIGCQ92535 297 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 SIGLEC12Q96PQ1 595 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 CYP2S1Q96SQ9 504 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 NPAS2Q99743 824 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 CITED1Q99966 193 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 UFSP2Q9NUQ7 469 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 IL36GQ9NZH8 169 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 WRAP73Q9P2S5 460 aaPredicted RBP4.06□□□□□ -1.76
VRK1-205ENST00000555402 SPRR3Q9UBC9 169 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 USP16Q9Y5T5 823 aa4.06□□□□□ -1.76
VRK1-205ENST00000555402 IGHV3-35A0A0C4DH35 117 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 IGHV2-70DA0A0C4DH43 119 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 B4DXG7 233 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 KIF2AO00139 706 aaPredicted RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 RS1O15537 224 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 NUDT21O43809 227 aaKnown RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 TSC22D2O75157 780 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 SURF6O75683 361 aaKnown RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 CABYRO75952 493 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 PCMT1P22061 227 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 MDH2P40926 338 aaKnown RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 P2RY1P47900 373 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 EFNA3P52797 238 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 TRIM16LQ309B1 348 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 OLFML2AQ68BL7 652 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 TPGS2Q68CL5 300 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 SPINK14Q6IE38 97 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 OR5M10Q6IEU7 315 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 Q6ZPB1 254 aaPredicted RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 EFL1Q7Z2Z2 1120 aaKnown RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 CDC20BQ86Y33 519 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 HPS6Q86YV9 775 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 BHLHE23Q8NDY6 225 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 KLHL30-AS1Q8NEE0 82 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 BADQ92934 168 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 CELF6Q96J87 481 aaKnown RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 FOXN4Q96NZ1 517 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 RPRD1AQ96P16 312 aaPredicted RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 SECISBP2Q96T21 854 aaKnown RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 ZBTB18Q99592 522 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 TMEM43Q9BTV4 400 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 RIMS3Q9UJD0 308 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 CDH9Q9ULB4 789 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 HPCAL4Q9UM19 191 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 MEMO1Q9Y316 297 aa4.05□□□□□ -1.76
VRK1-205ENST00000555402 COL5A2P05997 1499 aaPredicted RBP4.05□□□□□ -1.76
VRK1-205ENST00000555402 TRAV26-1A0A087WT03 109 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 LOC100131303A0A0U1RQF7 123 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 SMIM28A0A1B0GU29 152 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 E7ESA3 106 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 SULT2B1O00204 365 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 LATO43561 262 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 OPN1MWP04001 364 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 CCDC166P0CW27 439 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 OPN1MW2P0DN77 364 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 OPN1MW3P0DN78 364 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 CCDC130P13994 396 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 CYP2B6P20813 491 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 VDAC1P21796 283 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 PRKAR2BP31323 418 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 RDXP35241 583 aaKnown RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 GCKP35557 465 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 CEBPDP49716 269 aaPredicted RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 SLC10A7Q0GE19 358 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 SLC25A52Q3SY17 297 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 PAGE2BQ5JRK9 111 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 ZNF658Q5TYW1 1059 aaPredicted RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 LIPNQ5VXI9 398 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 CGB2Q6NT52 195 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 FAM199XQ6PEV8 388 aaPredicted RBP4.04□□□□□ -1.76
VRK1-205ENST00000555402 P2RY8Q86VZ1 359 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 TCTEX1D2Q8WW35 142 aa4.04□□□□□ -1.76
VRK1-205ENST00000555402 NOL4LQ96MY1 436 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms