RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TRGV5A0A0B4J1U4 118 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 AQP7O14520 342 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 ARPC2O15144 300 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 TPST2O60704 377 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 FMO6PO60774 539 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 CYP7B1O75881 506 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 SERPINA1P01009 418 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 PRB1P04280 392 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 GKN3PP0CG01 181 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 PRG2P13727 222 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF17P17021 662 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 PRKCAP17252 672 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 HK1P19367 917 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 CHMP24386 653 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 GFRA1P56159 465 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 SESN3P58005 492 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 B3GALT5-AS1P59052 145 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 QPRTQ15274 297 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 TOMM34Q15785 309 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-219ENST00000555323 LRRC23Q53EV4 343 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-219ENST00000555323 WIPI1Q5MNZ9 446 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-219ENST00000555323 LCN8Q6JVE9 175 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 ARHGAP11AQ6P4F7 1023 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 YRDCQ86U90 279 aaKnown RBP11.49□□□□□ -0.57
SYNE2-219ENST00000555323 CHERPQ8IWX8 916 aaKnown RBP11.49□□□□□ -0.57
SYNE2-219ENST00000555323 ULK2Q8IYT8 1036 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 GHDCQ8N2G8 530 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 GTPBP8Q8N3Z3 284 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-219ENST00000555323 POC1BQ8TC44 478 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 TMEM234Q8WY98 164 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 POP5Q969H6 163 aaKnown RBP11.49□□□□□ -0.57
SYNE2-219ENST00000555323 FAM162AQ96A26 154 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 MRGPRX4Q96LA9 322 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 NSMCE2Q96MF7 247 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 PIGQQ9BRB3 760 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 ADAM19Q9H013 955 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 ACER3Q9NUN7 267 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 RPS6KA6Q9UK32 745 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 DKKL1Q9UK85 242 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 SAMD4AQ9UPU9 718 aaKnown RBP11.49□□□□□ -0.57
SYNE2-219ENST00000555323 SPTA1P02549 2419 aa11.49□□□□□ -0.57
SYNE2-219ENST00000555323 IGSF10Q6WRI0 2623 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 SPENQ96T58 3664 aaKnown RBP11.48□□□□□ -0.57
SYNE2-219ENST00000555323 OR14I1A6ND48 311 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 AP3D1O14617 1153 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 PDE5AO76074 875 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 NUDT14O95848 222 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 ACTL6AO96019 429 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 UQCRBP14927 111 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 RYKP34925 604 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 SLC1A3P43003 542 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 IDH2P48735 452 aaKnown RBP11.48□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF41P51814 821 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-219ENST00000555323 TOMM20Q15388 145 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 MTX3Q5HYI7 312 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 VASNQ6EMK4 673 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 DHFR2Q86XF0 187 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 TMCO5AQ8N6Q1 288 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 ST6GALNAC3Q8NDV1 305 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 OR4D11Q8NGI4 311 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 OR6T1Q8NGN1 323 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 OR14L1PQ8NHC6 308 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 PROX1Q92786 737 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 MCUR1Q96AQ8 359 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 PYURFQ96I23 114 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 TSPAN10Q9H1Z9 355 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-219ENST00000555323 LDAHQ9H6V9 325 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 TESQ9UGI8 421 aaKnown RBP11.48□□□□□ -0.57
SYNE2-219ENST00000555323 SLC7A8Q9UHI5 535 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 POMPQ9Y244 141 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 VDAC3Q9Y277 283 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 SLC9A8Q9Y2E8 581 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 SH3GLB1Q9Y371 365 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 LIPGQ9Y5X9 500 aa11.48□□□□□ -0.57
SYNE2-219ENST00000555323 HEATR5AQ86XA9 2040 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 A0A1B0GTH9 108 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 TCRBV5S2A0A599 114 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 OR2M5A3KFT3 312 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 EIF4E1BA6NMX2 242 aaKnown RBP11.47□□□□□ -0.57
SYNE2-219ENST00000555323 FAM47E-STBD1D6RA91 191 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 FRS3O43559 492 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 EFNA2O43921 213 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 GMFGO60234 142 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 CDC40O60508 579 aaKnown RBP eCLIP11.47□□□□□ -0.57
SYNE2-219ENST00000555323 BMP7P18075 431 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 APOBEC1P41238 236 aaKnown RBP11.47□□□□□ -0.57
SYNE2-219ENST00000555323 HTR3AP46098 478 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 CCR4P51679 360 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 MAP2K6P52564 334 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 RGS8P57771 180 aaPredicted RBP11.47□□□□□ -0.57
SYNE2-219ENST00000555323 FOXK1P85037 733 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 KCNC4Q03721 635 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 NPTX1Q15818 432 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 WBP2NLQ6ICG8 309 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 AAGABQ6PD74 315 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 GRINAQ7Z429 371 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 FGD2Q7Z6J4 655 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 SPPL2CQ8IUH8 684 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms