RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CLPTM1LQ96KA5 538 aa12.96□□□□□ -0.33
CHD8-208ENST00000555301 PIGQQ9BRB3 760 aa12.96□□□□□ -0.33
CHD8-208ENST00000555301 RSPO3Q9BXY4 272 aaPredicted RBP12.96□□□□□ -0.33
CHD8-208ENST00000555301 EXO5Q9H790 373 aa12.96□□□□□ -0.33
CHD8-208ENST00000555301 PLSCR2Q9NRY7 297 aa12.96□□□□□ -0.33
CHD8-208ENST00000555301 DCAF13Q9NV06 445 aaKnown RBP12.96□□□□□ -0.33
CHD8-208ENST00000555301 SLC9A8Q9Y2E8 581 aa12.96□□□□□ -0.33
CHD8-208ENST00000555301 BOD1L1Q8NFC6 3051 aa12.96□□□□□ -0.34
CHD8-208ENST00000555301 NBEAQ8NFP9 2946 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 EXPH5Q8NEV8 1989 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 A0A1B0GVC2 190 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 ETV2O00321 342 aaPredicted RBP12.95□□□□□ -0.34
CHD8-208ENST00000555301 ZNF682O95780 498 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 ZNF17P17021 662 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 ADH6P28332 368 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 ACAA2P42765 397 aaKnown RBP12.95□□□□□ -0.34
CHD8-208ENST00000555301 TRAP1Q12931 704 aaKnown RBP12.95□□□□□ -0.34
CHD8-208ENST00000555301 MTX3Q5HYI7 312 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 RAET1LQ5VY80 246 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 ARHGAP11AQ6P4F7 1023 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 ASRGL1Q7L266 308 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 PRICKLE2Q7Z3G6 844 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 RANBP3LQ86VV4 465 aaPredicted RBP12.95□□□□□ -0.34
CHD8-208ENST00000555301 DHFR2Q86XF0 187 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 ULK2Q8IYT8 1036 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 GTPBP8Q8N3Z3 284 aaPredicted RBP12.95□□□□□ -0.34
CHD8-208ENST00000555301 NEIL3Q8TAT5 605 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 CCDC124Q96CT7 223 aaKnown RBP12.95□□□□□ -0.34
CHD8-208ENST00000555301 TPD52L3Q96J77 140 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 MRGPRX4Q96LA9 322 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 SFXN2Q96NB2 322 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 ARHGDIGQ99819 225 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 SLC6A15Q9H2J7 730 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 TESQ9UGI8 421 aaKnown RBP12.95□□□□□ -0.34
CHD8-208ENST00000555301 RPH3AQ9Y2J0 694 aaPredicted RBP12.95□□□□□ -0.34
CHD8-208ENST00000555301 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
CHD8-208ENST00000555301 CNTRLQ7Z7A1 2325 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 AQP7O14520 342 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 AP3D1O14617 1153 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 FRS3O43559 492 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 FMO6PO60774 539 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 ADAM11O75078 769 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 C1QL1O75973 258 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 ACTL6AO96019 429 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 GP1BBP13224 206 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 PRKCAP17252 672 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 CHMP24386 653 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 HTR3AP46098 478 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 IDH2P48735 452 aaKnown RBP12.94□□□□□ -0.34
CHD8-208ENST00000555301 DLX5P56178 289 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 SESN3P58005 492 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 TOMM34Q15785 309 aaPredicted RBP12.94□□□□□ -0.34
CHD8-208ENST00000555301 NRF1Q16656 503 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 TMEM44Q2T9K0 475 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 SLC25A53Q5H9E4 307 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 NHSL2Q5HYW2 709 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 LCN8Q6JVE9 175 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 FKBP9P1Q75LS8 142 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 GRINAQ7Z429 371 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 COMTD1Q86VU5 262 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 KLHDC3Q9BQ90 382 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 ZNF559Q9BR84 538 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 TRIM15Q9C019 465 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 TRIM2Q9C040 744 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 ACER3Q9NUN7 267 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 STOML1Q9UBI4 398 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 LIPGQ9Y5X9 500 aa12.94□□□□□ -0.34
CHD8-208ENST00000555301 TLN1Q9Y490 2541 aaKnown RBP12.94□□□□□ -0.34
CHD8-208ENST00000555301 A0A1B0GTH9 108 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 OR2M5A3KFT3 312 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 OR14I1A6ND48 311 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 TMEM229AB2RXF0 380 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 M0R3H8 397 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 PRG2P13727 222 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 TCEA1P23193 301 aaKnown RBP12.93□□□□□ -0.34
CHD8-208ENST00000555301 ELK4P28324 431 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 SLC1A3P43003 542 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 ZNF136P52737 540 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 GFRA1P56159 465 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 B3GALT5-AS1P59052 145 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 MS4A2Q01362 244 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 KCNC4Q03721 635 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 TLE1Q04724 770 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 RBPJQ06330 500 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 C19orf57Q0VDD7 668 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 FOXF1Q12946 379 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 ZSCAN26Q16670 478 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 IFI44LQ53G44 452 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 WBP2NLQ6ICG8 309 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 ENPP6Q6UWR7 440 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 GFRALQ6UXV0 394 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 CARM1Q86X55 608 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 SPPL2CQ8IUH8 684 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 LSMEM1Q8N8F7 131 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 ST6GALNAC3Q8NDV1 305 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 OR6T1Q8NGN1 323 aa12.93□□□□□ -0.34
CHD8-208ENST00000555301 GEMIN6Q8WXD5 167 aaKnown RBP12.93□□□□□ -0.34
CHD8-208ENST00000555301 SARAFQ96BY9 339 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms