RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 DPYSL5Q9BPU6 564 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 CNPPD1Q9BV87 410 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 ROGDIQ9GZN7 287 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 OR51B5Q9H339 312 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 DDX31Q9H8H2 851 aaKnown RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 TMEM165Q9HC07 324 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 TXNL4BQ9NX01 149 aaKnown RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 OCIAD1Q9NX40 245 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 POU2F3Q9UKI9 436 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 ACSL5Q9ULC5 683 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 MDC1Q14676 2089 aaKnown RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 MEIOCA2RUB1 952 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 A6NCN8 305 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 FABP12A6NFH5 140 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 OR52A4PA6NMU1 304 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 KDM4EB2RXH2 506 aaPredicted RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 B4DGG1 531 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 HMGN4O00479 90 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 CTDSP2O14595 271 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 POLR1CO15160 346 aaPredicted RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 TMCC2O75069 709 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 TMEM127O75204 238 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 SNAPC5O75971 98 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 HLA-DPB1P04440 258 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 SLC35G4P0C7Q5 338 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 POU1F1P28069 291 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 BSGP35613 385 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 TGFBR1P36897 503 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 STAT5AP42229 794 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 CCT3P49368 545 aaKnown RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 CD300CQ08708 224 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 TSPAN31Q12999 210 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 TRAM2Q15035 370 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 QPRTQ15274 297 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 INPP5JQ15735 1006 aaPredicted RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 DUSP7Q16829 419 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 BICRALQ6AI39 1079 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 SLC27A4Q6P1M0 643 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 FAM131AQ6UXB0 335 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 ZNF730Q6ZMV8 503 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 RASSF6Q6ZTQ3 369 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 ZNF438Q7Z4V0 828 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 NRARPQ7Z6K4 114 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 C17orf82Q86X59 251 aaPredicted RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 PLCZ1Q86YW0 608 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 SLC43A2Q8N370 569 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 HORMAD2Q8N7B1 307 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 BMPERQ8N8U9 685 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 PSD4Q8NDX1 1056 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 DUSP18Q8NEJ0 188 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 GPR32P1Q8NGA4 272 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 OR4D9Q8NGE8 314 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 OR52N1Q8NH53 320 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 PATE1Q8WXA2 126 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 TFGQ92734 400 aaPredicted RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 PMM1Q92871 262 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 OSTF1Q92882 214 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 C12orf66Q96MD2 445 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 C5orf34Q96MH7 638 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 SLX1AQ9BQ83 275 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 INPP5EQ9NRR6 644 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 DDX28Q9NUL7 540 aaKnown RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 QPCTLQ9NXS2 382 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 KLHL28Q9NXS3 571 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 PTTG3PQ9NZH4 202 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 SLC13A4Q9UKG4 626 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 PLAGL1Q9UM63 463 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 TMEM184BQ9Y519 407 aaPredicted RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 N6AMT1Q9Y5N5 214 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 SNX8Q9Y5X2 465 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 MRPS18BQ9Y676 258 aaKnown RBP10.3□□□□□ -0.76
SRP54-205ENST00000554803 PCSK5Q92824 1860 aa10.3□□□□□ -0.76
SRP54-205ENST00000554803 TRBV23OR9-2A0A075B6M9 112 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 RHPN2P1A8MT19 583 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 J3KTA2 159 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 PLPP1O14494 284 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 NDUFS4O43181 175 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 ARHGEF9O43307 516 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 KLHL18O94889 574 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 C1QCP02747 245 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 HMGN1P05114 100 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 FHP07954 510 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 HBQ1P09105 142 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 IFI6P09912 130 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 NR2F1P10589 423 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 SPNP16150 400 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 ZNF24P17028 368 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 TNFRSF1BP20333 461 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 CD1CP29017 333 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 ABATP80404 500 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 PRR5P85299 388 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 TGM3Q08188 693 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 SQSTM1Q13501 440 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 GINS1Q14691 196 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 GANABQ14697 944 aaKnown RBP10.29□□□□□ -0.76
SRP54-205ENST00000554803 RPE65Q16518 533 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 SYT14P1Q58G82 188 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 ZNF628Q5EBL2 1059 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 C1QTNF12Q5T7M4 302 aa10.29□□□□□ -0.76
SRP54-205ENST00000554803 TRIQKQ629K1 86 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms