RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SLC17A9Q9BYT1 436 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF436Q9C0F3 470 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 QRSL1Q9H0R6 528 aaKnown RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 FGF22Q9HCT0 170 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 CYSLTR2Q9NS75 346 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 MAN2C1Q9NTJ4 1040 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 HCN3Q9P1Z3 774 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF624Q9P2J8 865 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 APOBEC3BQ9UH17 382 aaKnown RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 FBXW2Q9UKT8 454 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 RFXAPO00287 272 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 NTN1O95631 604 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 AIFM1O95831 613 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 NR2F1P10589 423 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 DRD2P14416 443 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 HIST1H1TP22492 207 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-207ENST00000553837 ATP5A1P25705 553 aaKnown RBP11.39□□□□□ -0.59
SHMT2-207ENST00000553837 TEAD1P28347 426 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 LCN1P31025 176 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 BTCP35070 178 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 PITPNBP48739 271 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 ARHGDIBP52566 201 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 RAG2P55895 527 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 SMIM11AP58511 58 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 RAB8AP61006 207 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 TRA2BP62995 288 aaKnown RBP11.39□□□□□ -0.59
SHMT2-207ENST00000553837 RPE65Q16518 533 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 NHLRC3Q5JS37 347 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 PODNL1Q6PEZ8 512 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 YAF2Q8IY57 180 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 ARIH2OSQ8N7S6 290 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 OR8D4Q8NGM9 314 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 OR6T1Q8NGN1 323 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 OR5M3Q8NGP4 307 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 GANCQ8TET4 914 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 ZFPM2Q8WW38 1151 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 RNFT2Q96EX2 444 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 FCRL4Q96PJ5 515 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 PBX4Q9BYU1 374 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 CTPS2Q9NRF8 586 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 HPF1Q9NWY4 346 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 P2RX2Q9UBL9 471 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 CES1P1Q9UKY3 287 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 CLCA2Q9UQC9 943 aa11.39□□□□□ -0.59
SHMT2-207ENST00000553837 LOC105369274A0A096LPK9 316 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 CCDC85CA6NKD9 419 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 SLC31A1O15431 190 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 HMGN2P05204 90 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 PPP2CBP62714 309 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 RPS21P63220 83 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 PPP2CAP67775 309 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 SGCGQ13326 291 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 KRT33BQ14525 404 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 LASP1Q14847 261 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 TMEM91Q6ZNR0 172 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 KRT74Q7RTS7 529 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 PRICKLE2Q7Z3G6 844 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 FGD2Q7Z6J4 655 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 OR4N4Q8N0Y3 316 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ST8SIA2Q92186 375 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ATOH1Q92858 354 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ZG16BQ96DA0 208 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 BBS4Q96RK4 519 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF607Q96SK3 696 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 APOOQ9BUR5 198 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 TMED9Q9BVK6 235 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 RNF32Q9H0A6 362 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 SAV1Q9H4B6 383 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 TBC1D17Q9HA65 648 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 LIPT1Q9Y234 373 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 CA5BQ9Y2D0 317 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 EYSQ5T1H1 3165 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 PQLC2LA1A4F0 135 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 POM121BA6NF01 834 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 GABRPO00591 440 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ST8SIA5O15466 376 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 PLRG1O43660 514 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 SSNA1O43805 119 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 UGT2B7P16662 529 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 COL9A1P20849 921 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 RBMS1P29558 406 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ACSL1P33121 698 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 GIPRP48546 466 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 EPHA4P54764 986 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 GAS1P54826 345 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 CRYZQ08257 329 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 GINS1Q14691 196 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 SLC9A5Q14940 896 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 TMEM35AQ53FP2 167 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 TMEM196Q5HYL7 178 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF776Q68DI1 518 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ZER1Q7Z7L7 766 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ASPGQ86U10 573 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 SHISA5Q8N114 240 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 FTMTQ8N4E7 242 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 CLRN3Q8NCR9 226 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 RBM14Q96PK6 669 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 TRMT61BQ9BVS5 477 aaKnown RBP11.38□□□□□ -0.59
SHMT2-207ENST00000553837 ACTR6Q9GZN1 396 aa11.38□□□□□ -0.59
SHMT2-207ENST00000553837 C6orf106Q9H6K1 298 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms