RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 OGFOD2Q6N063 350 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 ADAM5Q6NVV9 412 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 MISPQ8IVT2 679 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 CLECL1Q8IZS7 167 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 FNDC9Q8TBE3 224 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 ACTRT2Q8TDY3 377 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 ADAMTS15Q8TE58 950 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 DYDC1Q8WWB3 177 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 JADE3Q92613 823 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 TESCQ96BS2 214 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 NPAS1Q99742 590 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 KLHDC3Q9BQ90 382 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 SERHL2Q9H4I8 314 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 FAF1Q9UNN5 650 aaPredicted RBP10.55□□□□□ -0.72
SRP54-203ENST00000553544 EMC9Q9Y3B6 208 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 AP4B1Q9Y6B7 739 aa10.55□□□□□ -0.72
SRP54-203ENST00000553544 A0A087WZY1 265 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 PRSS51A0A1B0GVH4 220 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 SCDO00767 359 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 SDHDO14521 159 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 CFLARO15519 480 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 ALDOCP09972 364 aaKnown RBP10.54□□□□□ -0.72
SRP54-203ENST00000553544 FCGR2AP12318 317 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 ZNF17P17021 662 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 IL11P20809 199 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 ACVR1BP36896 505 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 CLDN20P56880 219 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 CD226Q15762 336 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 PLPPR5Q32ZL2 321 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 KLHL26Q53HC5 615 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 HSP90B2PQ58FF3 399 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 DCST2Q5T1A1 773 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 BHLHB9Q6PI77 547 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 STAC2Q6ZMT1 411 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 BEND4Q6ZU67 534 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 C6orf120Q7Z4R8 191 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 MTERF4Q7Z6M4 381 aaKnown RBP10.54□□□□□ -0.72
SRP54-203ENST00000553544 GGNQ86UU5 652 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 WFDC8Q8IUA0 241 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 GTPBP8Q8N3Z3 284 aaPredicted RBP10.54□□□□□ -0.72
SRP54-203ENST00000553544 METTL25Q8N6Q8 603 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 GATSQ8NAP1 163 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 OR5AK3PQ8NH89 298 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 ZBTB8AQ96BR9 441 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 OR7D2Q96RA2 312 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 PRRG4Q9BZD6 226 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 DPY30Q9C005 99 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 HOXD1Q9GZZ0 328 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 SLCO5A1Q9H2Y9 848 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 THAP1Q9NVV9 213 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 STOML1Q9UBI4 398 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 CDC42EP3Q9UKI2 254 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 VDAC3Q9Y277 283 aa10.54□□□□□ -0.72
SRP54-203ENST00000553544 RAI1Q7Z5J4 1906 aaPredicted RBP10.53□□□□□ -0.72
SRP54-203ENST00000553544 TRPC5OSA6NMA1 111 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 SHISA8B8ZZ34 492 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 H3BML4 177 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 HDAC3O15379 428 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 SEC14L5O43304 696 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 GMFGO60234 142 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 PLGP00747 810 aaPredicted RBP10.53□□□□□ -0.72
SRP54-203ENST00000553544 FESP07332 822 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 LINGO3P0C6S8 592 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 HPGDP15428 266 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 MATN1P21941 496 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 ATP12AP54707 1039 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 CTBP2P56545 445 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 GUSBP1Q15486 140 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 DPY19L1Q2PZI1 675 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 SPDYE7PQ495Y7 208 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.53□□□□□ -0.72
SRP54-203ENST00000553544 AP1ARQ63HQ0 302 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 STK32CQ86UX6 486 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 OR5D16Q8NGK9 328 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 OR6K3Q8NGY3 331 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 B4GALNT2Q8NHY0 566 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 POC1BQ8TC44 478 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 MIPOL1Q8TD10 442 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 MGARPQ8TDB4 240 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 SMAP2Q8WU79 429 aaPredicted RBP10.53□□□□□ -0.72
SRP54-203ENST00000553544 FBXW5Q969U6 566 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 CHMP6Q96FZ7 201 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 ADGRG7Q96K78 797 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 TEX37Q96LM6 180 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 SDF2Q99470 211 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 RHNO1Q9BSD3 238 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
SRP54-203ENST00000553544 BEX2Q9BXY8 128 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 AMBRA1Q9C0C7 1298 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 ACTR6Q9GZN1 396 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 OR10A4Q9H209 315 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 MED17Q9NVC6 651 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 ICAM5Q9UMF0 924 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 LIPT1Q9Y234 373 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 GPR52Q9Y2T5 361 aa10.53□□□□□ -0.72
SRP54-203ENST00000553544 NPIPA5A0A0B4J1W7 369 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 RNF103-CHMP3A0A140T963 221 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 DUXAA6NLW8 204 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 NPIPA7E9PJI5 369 aa10.52□□□□□ -0.73
SRP54-203ENST00000553544 KLF11O14901 512 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms