RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TMEM38AQ9H6F2 299 aa16.63■□□□□ 0.25
CPSF2-202ENST00000553427 PAQR5Q9NXK6 330 aaPredicted RBP16.63■□□□□ 0.25
CPSF2-202ENST00000553427 ZNF629Q9UEG4 869 aaPredicted RBP16.63■□□□□ 0.25
CPSF2-202ENST00000553427 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.63■□□□□ 0.25
CPSF2-202ENST00000553427 ZNF175Q9Y473 711 aa16.63■□□□□ 0.25
CPSF2-202ENST00000553427 BBIP1A8MTZ0 92 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 EVPLLA8MZ36 301 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 ADAMDEC1O15204 470 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 IL18BPO95998 194 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 NUDT7P0C024 238 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 ARAFP10398 606 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 ME2P23368 584 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 CCR4P51679 360 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 SUCLG1P53597 346 aaKnown RBP16.62■□□□□ 0.25
CPSF2-202ENST00000553427 RPS3AP61247 264 aaKnown RBP16.62■□□□□ 0.25
CPSF2-202ENST00000553427 TFF3Q07654 80 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 QPRTQ15274 297 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 TOMM34Q15785 309 aaPredicted RBP16.62■□□□□ 0.25
CPSF2-202ENST00000553427 LIN52Q52LA3 116 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 RUNDC3AQ59EK9 446 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 RNF220Q5VTB9 566 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 ESPNLQ6ZVH7 1005 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 CHMP1BQ7LBR1 199 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 UBQLNLQ8IYU4 475 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 C9orf106Q8NAJ2 232 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 ACBD4Q8NC06 268 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 NAXEQ8NCW5 288 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 BBS10Q8TAM1 723 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 TMEM234Q8WY98 164 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 ANKRD27Q96NW4 1050 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 CGREF1Q99674 301 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 ACER3Q9NUN7 267 aa16.62■□□□□ 0.25
CPSF2-202ENST00000553427 DNAJB12Q9NXW2 375 aaKnown RBP16.62■□□□□ 0.25
CPSF2-202ENST00000553427 FAAHO00519 579 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 SEC14L5O43304 696 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 BCAS1O75363 584 aaPredicted RBP16.61■□□□□ 0.25
CPSF2-202ENST00000553427 RCBTB2O95199 551 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 IL7RP16871 459 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 LSP1P33241 339 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 ZNF136P52737 540 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 EEF1A1P68104 462 aaKnown RBP16.61■□□□□ 0.25
CPSF2-202ENST00000553427 SELENBP1Q13228 472 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 CTU2Q2VPK5 515 aaKnown RBP16.61■□□□□ 0.25
CPSF2-202ENST00000553427 TRMT5Q32P41 509 aaKnown RBP16.61■□□□□ 0.25
CPSF2-202ENST00000553427 EEF1A1P5Q5VTE0 462 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 POMZP3Q6PJE2 187 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 GRAMD2AQ8IUY3 354 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 ZNF440Q8IYI8 595 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 OR52P1PQ8NH57 321 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 FBXO27Q8NI29 283 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 SMPDL3BQ92485 455 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 THUMPD3Q9BV44 507 aaKnown RBP16.61■□□□□ 0.25
CPSF2-202ENST00000553427 KCNJ16Q9NPI9 418 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 CAPN7Q9Y6W3 813 aa16.61■□□□□ 0.25
CPSF2-202ENST00000553427 CDHR4A6H8M9 788 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 SLC22A20A6NK97 555 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 CLDN24A6NM45 220 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 GJE1A6NN92 205 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 H0YC42 278 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 FBP2O00757 339 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 DVL2O14641 736 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 CYP7B1O75881 506 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 NPPAP01160 153 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 CRHP06850 196 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 ETS2P15036 469 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 CTSSP25774 331 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 GRNP28799 593 aaKnown RBP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 TPD52P55327 224 aaPredicted RBP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 SF3A3Q12874 501 aaKnown RBP eCLIP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 NFYCQ13952 458 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 LARS2Q15031 903 aaKnown RBP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 MRPL2Q5T653 305 aaKnown RBP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 OR2A2Q6IF42 318 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 SPATA21Q7Z572 469 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 LIX1LQ8IVB5 337 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 C10orf111Q8N326 155 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 OR2V1Q8NHB1 315 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 CNOT9Q92600 299 aaKnown RBP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 MAL2Q969L2 176 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 SLC35B4Q969S0 331 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 ZNF524Q96C55 264 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 KLHL15Q96M94 604 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 SFXN3Q9BWM7 321 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 NSRP1Q9H0G5 558 aaKnown RBP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 CACYBPQ9HB71 228 aaKnown RBP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 ZNF443Q9Y2A4 671 aaPredicted RBP16.6■□□□□ 0.25
CPSF2-202ENST00000553427 IFT52Q9Y366 437 aa16.6■□□□□ 0.25
CPSF2-202ENST00000553427 KIAA1549Q9HCM3 1950 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 HEATR5AQ86XA9 2040 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 FAM90A27PA6NNH2 459 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 C5orf58C9J3I9 102 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 EFNA2O43921 213 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 CCDC22O60826 627 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 PGM3O95394 542 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 TGM6O95932 706 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 TMIGD3P0DMS9 266 aaPredicted RBP16.59■□□□□ 0.25
CPSF2-202ENST00000553427 FCGR2AP12318 317 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 OPRM1P35372 400 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 SESN3P58005 492 aa16.59■□□□□ 0.25
CPSF2-202ENST00000553427 CDK6Q00534 326 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms