RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 RADILQ96JH8 1075 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 ANKZF1Q9H8Y5 726 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 TNFRSF12AQ9NP84 129 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 NTMQ9P121 344 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 KCNS2Q9ULS6 477 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 ICAM5Q9UMF0 924 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 WBP11Q9Y2W2 641 aaKnown RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 PTGDR2Q9Y5Y4 395 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 GPC6Q9Y625 555 aaPredicted RBP8□□□□□ -1.13
SYNE2-209ENST00000553308 MALRD1Q5VYJ5 2156 aa8□□□□□ -1.13
SYNE2-209ENST00000553308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8□□□□□ -1.13
SYNE2-209ENST00000553308 LOC100289279A0A1B0GTE1 492 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 NPIPB8E9PQR5 432 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 M0R1B8 84 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 WIPF1O43516 503 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 AKAP10O43572 662 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 CYTIPO60759 359 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 H6PDO95479 791 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 SNRPAP09012 282 aaKnown RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 CSF3P09919 207 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 PTAFRP25105 342 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 FRKP42685 505 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 SERPINB4P48594 390 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 GZMKP49863 264 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 EFNA4P52798 201 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 SUMO3P55854 103 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 CHRNEQ04844 493 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 GGTLC2Q14390 218 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 KIAA0040Q15053 153 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 KLHL26Q53HC5 615 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 ARL13AQ5H913 290 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 FAM166AQ6J272 317 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 C8orf74Q6P047 294 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 LRIG3Q6UXM1 1119 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 TRIM46Q7Z4K8 759 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 MTERF4Q7Z6M4 381 aaKnown RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 P2RY8Q86VZ1 359 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF100Q8IYN0 542 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 CLHC1Q8NHS4 586 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 GPR119Q8TDV5 335 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 PROX1Q92786 737 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 PPCDCQ96CD2 204 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 MSI2Q96DH6 328 aaKnown RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 CHMP6Q96FZ7 201 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF764Q96H86 408 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 MRGPRX4Q96LA9 322 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 TSSK3Q96PN8 268 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 OR5B2Q96R09 309 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 BTBD2Q9BX70 525 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 EML4Q9HC35 981 aaKnown RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 SIRT3Q9NTG7 399 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-209ENST00000553308 SH3BP4Q9P0V3 963 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 MGAT4BQ9UQ53 548 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 CCL27Q9Y4X3 112 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 ACTL7BQ9Y614 415 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 SLC25A15Q9Y619 301 aa7.99□□□□□ -1.13
SYNE2-209ENST00000553308 CIB4A0PJX0 185 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 CCT8L1PA6NM43 557 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF724A8MTY0 619 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 VWC2LB2RUY7 222 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 SEC22BO75396 215 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 CRCPO75575 148 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 HMGN2P05204 90 aaKnown RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 SDC1P18827 310 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ATP6V1C1P21283 382 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 GCAP28676 217 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 CCR4P51679 360 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 FOXG1P55316 489 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 PDE7AQ13946 482 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 LASP1Q14847 261 aaKnown RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 QPRTQ15274 297 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 SLC25A53Q5H9E4 307 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 FBXW9Q5XUX1 488 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ABLIM2Q6H8Q1 611 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF544Q6NX49 715 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 CDC73Q6P1J9 531 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 C3orf33Q6P1S2 294 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ZCCHC12Q6PEW1 402 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 KLHL17Q6TDP4 642 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 SSX8Q7RTT4 187 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF572Q7Z3I7 529 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 GALNT5Q7Z7M9 940 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 UBE2J2Q8N2K1 259 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 TMCO5AQ8N6Q1 288 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF614Q8N883 585 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ZNF527Q8NB42 609 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 RFWD2Q8NHY2 731 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 C3orf49Q96BT1 292 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 FAM120BQ96EK7 910 aaKnown RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 INPP5KQ9BT40 448 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 PRR14Q9BWN1 585 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 C1QTNF6Q9BXI9 259 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 IQCGQ9H095 443 aaKnown RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 QRSL1Q9H0R6 528 aaKnown RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 REEP4Q9H6H4 257 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 RRAGDQ9NQL2 400 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 DUSP22Q9NRW4 184 aa7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ACSS1Q9NUB1 689 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 ZCCHC3Q9NUD5 404 aaKnown RBP7.98□□□□□ -1.13
SYNE2-209ENST00000553308 TRAF6Q9Y4K3 522 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 368.2 ms