RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PRKCAP17252 672 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 PGCP20142 388 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 IL12AP29459 219 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 CPOXP36551 454 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 CD79BP40259 229 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 CTBP2P56545 445 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 FOXF1Q12946 379 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 SELENBP1Q13228 472 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 SKP2Q13309 424 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 SLC9B1Q4ZJI4 515 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 TYW3Q6IPR3 259 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 PPP4R4Q6NUP7 873 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 EPGNQ6UW88 154 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 HDXQ7Z353 690 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 ZNF619Q8N2I2 560 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 OR6K3Q8NGY3 331 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 LRRC8CQ8TDW0 803 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 RAB8BQ92930 207 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 NINJ1Q92982 152 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 CPNE4Q96A23 557 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 TRNT1Q96Q11 434 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 GPATCH1Q9BRR8 931 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 VIPAS39Q9H9C1 493 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 GP6Q9HCN6 339 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 PLSCR4Q9NRQ2 329 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 KCNE5Q9UJ90 142 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 PRDM4Q9UKN5 801 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 SH3D21A4FU49 640 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 HMGB1P1B2RPK0 211 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 HMGN4O00479 90 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 RFXANKO14593 260 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 OIP5O43482 229 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 DIAPH2O60879 1101 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 SS18L1O75177 396 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 AQP8O94778 261 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 NTN1O95631 604 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 ZCCHC18P0CG32 403 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 POU2F1P14859 743 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 FKBP2P26885 142 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 CCR4P51679 360 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 CASP9P55211 416 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 SIRPAP78324 504 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 GNA13Q14344 377 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 QPRTQ15274 297 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 RNPS1Q15287 305 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 GPAT3Q53EU6 434 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 FBXW10Q5XX13 1052 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 RNF130Q86XS8 419 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 CMIPQ8IY22 773 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 MIER2Q8N344 545 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 RFWD2Q8NHY2 731 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 NPAS1Q99742 590 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 THUMPD3Q9BV44 507 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 TMEM185BQ9H7F4 350 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 MTHFD2LQ9H903 347 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 SERINC1Q9NRX5 453 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 THUMPD1Q9NXG2 353 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 ITGB1BP2Q9UKP3 347 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 USH1CQ9Y6N9 552 aa11.79□□□□□ -0.52
HNRNPC-205ENST00000553300 C16orf97H3BN30 126 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 EFNA2O43921 213 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 H6PDO95479 791 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 ANP32DO95626 131 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 OPN1LWP04000 364 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 UBTFL6P0CB48 400 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 SLC7A1P30825 629 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 DNAJA1P31689 397 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 SFTPDP35247 375 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 KCNJ5P48544 419 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 POLR2JP52435 117 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 IRX1P78414 480 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 KCNJ10P78508 379 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 TOMM34Q15785 309 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 TMEM176BQ3YBM2 270 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 TIGD2Q4W5G0 525 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 C3orf33Q6P1S2 294 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 FRRS1Q6ZNA5 592 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 LRRC74BQ6ZQY2 392 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 MAVSQ7Z434 540 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 STK32CQ86UX6 486 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 CDC20BQ86Y33 519 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 SLC43A2Q8N370 569 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 FAM71CQ8NEG0 241 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 ZFP90Q8TF47 636 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 DYDC1Q8WWB3 177 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 ITCHQ96J02 903 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 OR52B2Q96RD2 323 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 KLHDC3Q9BQ90 382 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 OPN3Q9H1Y3 402 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 EXOSC3Q9NQT5 275 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 ZNF226Q9NYT6 803 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 CALML5Q9NZT1 146 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 CELSR1Q9NYQ6 3014 aa11.78□□□□□ -0.52
HNRNPC-205ENST00000553300 F8P00451 2351 aa11.77□□□□□ -0.53
HNRNPC-205ENST00000553300 FAM234BA2RU67 622 aa11.77□□□□□ -0.53
HNRNPC-205ENST00000553300 C9JVG2 144 aa11.77□□□□□ -0.53
HNRNPC-205ENST00000553300 POLR3GO15318 223 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms