RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TRIM15Q9C019 465 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 RHBGQ9H310 441 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 DHRS4-AS1Q9P1J3 65 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 SEC14L3Q9UDX4 400 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 PRSS21Q9Y6M0 314 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 ARHGEF35A5YM69 484 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 EFCAB7A8K855 629 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 B4DXG7 233 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 FCN1O00602 326 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 PRKAB2O43741 272 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 ERLIN1O75477 346 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SCRG1O75711 98 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 RHBDL1O75783 438 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 CIB2O75838 187 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 NDUFB10O96000 172 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SFTPCP11686 197 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 UGT1A5P35504 534 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 RPL13AP40429 203 aaKnown RBP3.94□□□□□ -1.78
SCFD1-209ENST00000553280 RPL34P49207 117 aaKnown RBP3.94□□□□□ -1.78
SCFD1-209ENST00000553280 EFNA3P52797 238 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 CUL2Q13617 745 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SLC15A2Q16348 729 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SSX2Q16385 188 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 C14orf177Q52M58 125 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 CEP85LQ5SZL2 805 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 PRAMEF5Q5TYX0 476 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 PRAMEF6Q5VXH4 476 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SLC47A2Q86VL8 602 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 C9orf40Q8IXQ3 194 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 OR9K2Q8NGE7 335 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 OR4D9Q8NGE8 314 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SLC2A14Q8TDB8 520 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 MAIP1Q8WWC4 291 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 RASL10AQ92737 203 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 CELF6Q96J87 481 aaKnown RBP3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SLC38A2Q96QD8 506 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 MCCC1Q96RQ3 725 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-209ENST00000553280 COPS8Q99627 209 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 VGLL1Q99990 258 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF670Q9BS34 389 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SLC35A5Q9BS91 424 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 ANP32EQ9BTT0 268 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 GPR61Q9BZJ8 451 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 ROPN1BQ9BZX4 212 aaPredicted RBP3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SMYD3Q9H7B4 428 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 POLE4Q9NR33 117 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF581Q9P0T4 197 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 SUN2Q9UH99 717 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF639Q9UID6 485 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 ERVW-1Q9UQF0 538 aa3.94□□□□□ -1.78
SCFD1-209ENST00000553280 TRAV9-2A0A087WT02 112 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 A0A1B0GVL5 298 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 GOLGA8OA6NCC3 632 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 ACOD1A6NK06 481 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 A8MX80 341 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 F5H6K3 240 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 GOLGA8NF8WBI6 632 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 MED7O43513 233 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 NOL4O94818 638 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 UQCRFS1P1P0C7P4 283 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 GCFC2P16383 781 aaKnown RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 POLR2EP19388 210 aaKnown RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 PTBP1P26599 531 aaKnown RBP eCLIP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 NF2P35240 595 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 SSR1P43307 286 aaKnown RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 FNTAP49354 379 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 KLRC3Q07444 240 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 KLRB1Q12918 225 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 MRGPRG-AS1Q2M3A8 158 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 CTSL3PQ5NE16 218 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 C1orf220Q5T0J3 134 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 OTUD3Q5T2D3 398 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 ATL3Q6DD88 541 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 OR2A2Q6IF42 318 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 FAM199XQ6PEV8 388 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 METAP1DQ6UB28 335 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 DHDDSQ86SQ9 333 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 SLC25A42Q86VD7 318 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 FAM228AQ86W67 206 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 TRIM69Q86WT6 500 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 CDR2LQ86X02 465 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 OR52K2Q8NGK3 314 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 VN1R17PQ8TDU5 208 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF689Q96CS4 500 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 C10orf35Q96D05 121 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 RASD2Q96D21 266 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 MTMR9Q96QG7 549 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 CYP2S1Q96SQ9 504 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 ELOVL4Q9GZR5 314 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 NAT10Q9H0A0 1025 aaKnown RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 GLT8D2Q9H1C3 349 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 PNNQ9H307 717 aaKnown RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 VCPKMTQ9H867 229 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 CAB39LQ9H9S4 337 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 NUDT15Q9NV35 164 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 PAK1IP1Q9NWT1 392 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-209ENST00000553280 RIMS3Q9UJD0 308 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 KLK13Q9UKR3 277 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 ANGPTL2Q9UKU9 493 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 PRPF19Q9UMS4 504 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms