RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 ICAM5Q9UMF0 924 aa12.54□□□□□ -0.4
CHMP1A-210ENST00000551981 CARD8Q9Y2G2 431 aa12.54□□□□□ -0.4
CHMP1A-210ENST00000551981 OR5H1A6NKK0 313 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 ZNF724A8MTY0 619 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 SLC28A1O00337 649 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 AKAP10O43572 662 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 CYTIPO60759 359 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 CSF3P09919 207 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 DHRS4L1P0CG22 281 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 UROSP10746 265 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 MYL2P10916 166 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 BMP4P12644 408 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 PRKCAP17252 672 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 COX5AP20674 150 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 PRPH2P23942 346 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 PTAFRP25105 342 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 FRKP42685 505 aaPredicted RBP12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 ETF1P62495 437 aaKnown RBP12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 CFAP157Q5JU67 520 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 C11orf71Q6IPW1 123 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 CBLN3Q6UW01 205 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 LRIG3Q6UXM1 1119 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 SYT10Q6XYQ8 523 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 GALNT5Q7Z7M9 940 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 ZNF525Q8N782 197 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 GPR119Q8TDV5 335 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 ACMSDQ8TDX5 336 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 CDS1Q92903 461 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 OTUB1Q96FW1 271 aaPredicted RBP12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 C19orf24Q9BVV8 132 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 MANSC1Q9H8J5 431 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 ZCCHC3Q9NUD5 404 aaKnown RBP12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 C1orf109Q9NX04 203 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 GIN1Q9NXP7 522 aa12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 ING1Q9UK53 422 aaPredicted RBP12.53□□□□□ -0.4
CHMP1A-210ENST00000551981 A0A1W2PNR3 127 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 C9JVG2 144 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 E7EQL1 145 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 H7C417 338 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 PGM3O95394 542 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 HMGN2P05204 90 aaKnown RBP12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF16P17020 682 aaPredicted RBP12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 SRD5A1P18405 259 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 IGHV1-2P23083 117 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 KIAA0040Q15053 153 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 TOMM34Q15785 309 aaPredicted RBP12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 KLHL26Q53HC5 615 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF385BQ569K4 471 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 EXOSC6Q5RKV6 272 aaKnown RBP12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 FRMD7Q6ZUT3 714 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 CNPY4Q8N129 248 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 TMCO5AQ8N6Q1 288 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 TOR1AIP2Q8NFQ8 470 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 ANP32BQ92688 251 aaKnown RBP12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 PROX1Q92786 737 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 MTERF3Q96E29 417 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 FAM120BQ96EK7 910 aaKnown RBP12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 TSSK3Q96PN8 268 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 PIGUQ9H490 435 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 EMC3Q9P0I2 261 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 DCDC2Q9UHG0 476 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 CCL27Q9Y4X3 112 aa12.52□□□□□ -0.41
CHMP1A-210ENST00000551981 CIB4A0PJX0 185 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 NPIPB8E9PQR5 432 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 SMAD9O15198 467 aaKnown RBP12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 OIP5O43482 229 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 LMX1BO60663 402 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 KRT16P08779 473 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 ABHD2P08910 425 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 SDC1P18827 310 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 USF1P22415 310 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 GCAP28676 217 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 ASMTP46597 345 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 GZMKP49863 264 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 RNF144AP50876 292 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 FABP6P51161 128 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF83P51522 516 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 CHRNB3Q05901 458 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 PDE7AQ13946 482 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 CBFBQ13951 182 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 LASP1Q14847 261 aaKnown RBP12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 SLC25A53Q5H9E4 307 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF544Q6NX49 715 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 C3orf33Q6P1S2 294 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 ZYG11AQ6WRX3 759 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 R3HCC1LQ7Z5L2 792 aaKnown RBP12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 UBE2J2Q8N2K1 259 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF433Q8N7K0 673 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF614Q8N883 585 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 OR5W2Q8NH69 310 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 RFWD2Q8NHY2 731 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 C10orf105Q8TEF2 133 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 HTRA1Q92743 480 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 OR5B2Q96R09 309 aa12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF300Q96RE9 604 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-210ENST00000551981 CCT8L1PA6NM43 557 aa12.5□□□□□ -0.41
CHMP1A-210ENST00000551981 G3V2L1 256 aa12.5□□□□□ -0.41
CHMP1A-210ENST00000551981 ZNF264O43296 627 aa12.5□□□□□ -0.41
CHMP1A-210ENST00000551981 EIF4E2O60573 245 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms