RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ALG10BQ5I7T1 473 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 NXNL2Q5VZ03 156 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 RHBDD2Q6NTF9 364 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 LINC00299Q6ZSB3 139 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CXXC5Q7LFL8 322 aaKnown RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SHFQ7M4L6 423 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 ADCK1Q86TW2 530 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 C9orf40Q8IXQ3 194 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 PRSS58Q8IYP2 241 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CADM2Q8N3J6 435 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SLC15A4Q8N697 577 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 PLPP5Q8NEB5 264 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 BBS1Q8NFJ9 593 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 KBTBD8Q8NFY9 601 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 OR52L1Q8NGH7 329 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 OR6Q1Q8NGQ2 317 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 OR14A16Q8NHC5 309 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 OIT3Q8WWZ8 545 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 BPIFA2Q96DR5 249 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CLIP3Q96DZ5 547 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 ZHX1-C8orf76Q96EF9 292 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 VMP1Q96GC9 406 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 PLEKHA8Q96JA3 519 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 LCORQ96JN0 433 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CENPOQ9BU64 300 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 VN1R1Q9GZP7 353 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SLIRPQ9GZT3 109 aaKnown RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 FN3KQ9H479 309 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 MKKSQ9NPJ1 570 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 AKIP1Q9NQ31 210 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CTSFQ9UBX1 484 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 ICAM5Q9UMF0 924 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SRPK3Q9UPE1 567 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CFL2Q9Y281 166 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 EXOGQ9Y2C4 368 aaKnown RBP10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SLC35A3Q9Y2D2 325 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CARD8Q9Y2G2 431 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 CORINQ9Y5Q5 1042 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 SEC16AO15027 2179 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 TECTAO75443 2155 aa10.58□□□□□ -0.72
RAB5C-208ENST00000551338 LOC100506127A0A0U1RQW1 187 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 J3QRK9 145 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 YKT6O15498 198 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 HCN1O60741 890 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 PTP4A3O75365 173 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 GPX5O75715 221 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 RCBTB2O95199 551 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 UTS2O95399 124 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 TIAF1O95411 115 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 SCG5P05408 212 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 IDUAP35475 653 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 ADH7P40394 386 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 SOX3P41225 446 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 MTNR1AP48039 350 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 SERPINB10P48595 397 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 GPR143P51810 404 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 ACY1Q03154 408 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.57□□□□□ -0.72
RAB5C-208ENST00000551338 FHL1Q13642 323 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 ULK3Q6PHR2 472 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 LANCL3Q6ZV70 420 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 USP43Q70EL4 1123 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 BMP8AQ7Z5Y6 402 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 RABEPKQ7Z6M1 372 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 ZNF440Q8IYI8 595 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 CDK20Q8IZL9 346 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 LNX2Q8N448 690 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 FAM181AQ8N9Y4 354 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 GATSQ8NAP1 163 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 C7orf57Q8NEG2 295 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 OR2I1PQ8NGU4 316 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 C3orf49Q96BT1 292 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 SH3YL1Q96HL8 342 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-208ENST00000551338 ART5Q96L15 291 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 CCDC74BQ96LY2 380 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 DACH2Q96NX9 599 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 CHCHD6Q9BRQ6 235 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 TEX12Q9BXU0 123 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 HOXD1Q9GZZ0 328 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 LRRN3Q9H3W5 708 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 RPS6KB2Q9UBS0 482 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 EXOSC1Q9Y3B2 195 aaKnown RBP10.57□□□□□ -0.72
RAB5C-208ENST00000551338 CLCA3PQ9Y6N3 262 aa10.57□□□□□ -0.72
RAB5C-208ENST00000551338 IGLV3-12A0A075B6K2 115 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 TRAV27A0A087WT01 109 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 A0A087WUJ7 227 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 IGHV5-10-1A0A0J9YXX1 117 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.56□□□□□ -0.72
RAB5C-208ENST00000551338 C2orf92A0A1B0GVN3 265 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 TMEM129A0AVI4 362 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 SNTNA6NMZ2 147 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 TO15178 435 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 DYRK3O43781 588 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 TSPAN2O60636 221 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 PPP1R3DO95685 299 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 IGHA1P01876 353 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 CFIP05156 583 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 LIMS3P0CW19 117 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 LIMS4P0CW20 117 aa10.56□□□□□ -0.72
RAB5C-208ENST00000551338 SAGP10523 405 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms