RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 NAV2Q8IVL1 2488 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 IGHV1-45A0A0A0MS14 117 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 SMIM31A0A1B0GVY4 71 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 A0A1B0GWA3 101 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 A6NHS1 94 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 SNTNA6NMZ2 147 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 H3BN98 237 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 M0R3G1 203 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 NDUFB5O43674 189 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 UMODP07911 640 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 LINGO3P0C6S8 592 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 GKN3PP0CG01 181 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 SMIM18P0DKX4 95 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 ITIH1P19827 911 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 CRHBPP24387 322 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 HTR2AP28223 471 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 OMPP47874 163 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 GTF2A1P52655 376 aaPredicted RBP11.54□□□□□ -0.56
CACNB3-217ENST00000550483 SMSP52788 366 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 PRKCDQ05655 676 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 SKP2Q13309 424 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 CDK5R2Q13319 367 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 SSPNQ14714 243 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 PCOLCEQ15113 449 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 PTGES3Q15185 160 aaKnown RBP11.54□□□□□ -0.56
CACNB3-217ENST00000550483 TMEM44Q2T9K0 475 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 CCDC157Q569K6 752 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 ALG10BQ5I7T1 473 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 ANKRD34AQ69YU3 496 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 LCN10Q6JVE6 187 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 TMPRSS11FQ6ZWK6 438 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 NDUFAF7Q7L592 441 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 TMPRSS12Q86WS5 348 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 FAM81AQ8TBF8 368 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 PHOSPHO1Q8TCT1 267 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 ELP5Q8TE02 316 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 IP6K3Q96PC2 410 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 ZNF426Q9BUY5 554 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 SPRY4Q9C004 299 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 SDHAF3Q9NRP4 125 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 PLCXD1Q9NUJ7 323 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 REV1Q9UBZ9 1251 aa11.54□□□□□ -0.56
CACNB3-217ENST00000550483 ZNF223Q9UK11 482 aaPredicted RBP11.54□□□□□ -0.56
CACNB3-217ENST00000550483 NSG1A0A0A6YYJ2 146 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 SLC1A7O00341 560 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 KLF4O43474 513 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 ICOSLGO75144 302 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 RCBTB2O95199 551 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 COX6A1P12074 109 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 POU2F1P14859 743 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 PGCP20142 388 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 POLR2IP36954 125 aaKnown RBP11.53□□□□□ -0.56
CACNB3-217ENST00000550483 ETV5P41161 510 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 NOVA1P51513 510 aaKnown RBP11.53□□□□□ -0.56
CACNB3-217ENST00000550483 SNRPGP62308 76 aaKnown RBP11.53□□□□□ -0.56
CACNB3-217ENST00000550483 PLAURQ03405 335 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 CBFBQ13951 182 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 ANKDD1AQ495B1 522 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 MEDAGQ5VYS4 303 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 C12orf73Q69YU5 71 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 TMEM81Q6P7N7 255 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 ZNF773Q6PK81 442 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 C5orf46Q6UWT4 87 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 DHRS13Q6UX07 377 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 NKAIN4Q8IVV8 208 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 NRMQ8IXM6 262 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 NLGN4XQ8N0W4 816 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 POGLUT1Q8NBL1 392 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 NLGN4YQ8NFZ3 816 aaPredicted RBP11.53□□□□□ -0.56
CACNB3-217ENST00000550483 OR8J1Q8NGP2 316 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 RHOXF1Q8NHV9 184 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 ARSGQ96EG1 525 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 IMMP1LQ96LU5 166 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 SLC38A2Q96QD8 506 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 SECISBP2Q96T21 854 aaKnown RBP11.53□□□□□ -0.56
CACNB3-217ENST00000550483 PRSS27Q9BQR3 290 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 NDEL1Q9GZM8 345 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 ADNPQ9H2P0 1102 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 CTPS2Q9NRF8 586 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 MED17Q9NVC6 651 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 MYOTQ9UBF9 498 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 TCFL5Q9UL49 500 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 BAIAP2Q9UQB8 552 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 FARSAQ9Y285 508 aaKnown RBP11.53□□□□□ -0.56
CACNB3-217ENST00000550483 SNX5Q9Y5X3 404 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 HS3ST3B1Q9Y662 390 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 CDH10Q9Y6N8 788 aa11.53□□□□□ -0.56
CACNB3-217ENST00000550483 A0A087WUJ7 227 aa11.52□□□□□ -0.57
CACNB3-217ENST00000550483 IGHV3-20A0A0C4DH32 117 aa11.52□□□□□ -0.57
CACNB3-217ENST00000550483 PCNX2A6NKB5 2137 aa11.52□□□□□ -0.57
CACNB3-217ENST00000550483 C9orf172C9J069 976 aa11.52□□□□□ -0.57
CACNB3-217ENST00000550483 AGRPO00253 132 aa11.52□□□□□ -0.57
CACNB3-217ENST00000550483 CDK2AP1O14519 115 aa11.52□□□□□ -0.57
CACNB3-217ENST00000550483 TP53I11O14683 189 aa11.52□□□□□ -0.57
CACNB3-217ENST00000550483 FADS1O60427 444 aa11.52□□□□□ -0.57
CACNB3-217ENST00000550483 CDC40O60508 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
CACNB3-217ENST00000550483 BCAS1O75363 584 aaPredicted RBP11.52□□□□□ -0.57
CACNB3-217ENST00000550483 SMNDC1O75940 238 aaKnown RBP eCLIP11.52□□□□□ -0.57
CACNB3-217ENST00000550483 LYPD3O95274 346 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms