RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PNPT1Q8TCS8 783 aaKnown RBP12.11□□□□□ -0.47
NUP188-211ENST00000550219 WNT2BQ93097 391 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 ALPK1Q96QP1 1244 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 THUMPD3Q9BV44 507 aaKnown RBP12.11□□□□□ -0.47
NUP188-211ENST00000550219 DSN1Q9H410 356 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 PIGUQ9H490 435 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 EQTNQ9NQ60 294 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 FLRT3Q9NZU0 649 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 PACSIN3Q9UKS6 424 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 SH3D21A4FU49 640 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 B4DXG7 233 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 HMGN4O00479 90 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 NME4O00746 187 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 RCBTB2O95199 551 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 TGM6O95932 706 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 ALOX5P09917 674 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 ETFAP13804 333 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 HK1P19367 917 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 KHKP50053 298 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 RASSF2P50749 326 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 ANXA11P50995 505 aaKnown RBP12.1□□□□□ -0.47
NUP188-211ENST00000550219 SLC7A2P52569 658 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 PNLIPRP2P54317 469 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 NCALDP61601 193 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 RPS26P62854 115 aaKnown RBP12.1□□□□□ -0.47
NUP188-211ENST00000550219 SIRPAP78324 504 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 PSPHP78330 225 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 MXRA7P84157 204 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 ZNHIT3Q15649 155 aaPredicted RBP12.1□□□□□ -0.47
NUP188-211ENST00000550219 DUSP5Q16690 384 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 AP1ARQ63HQ0 302 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 HEPHL1Q6MZM0 1159 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 TNFAIP8L2Q6P589 184 aaPredicted RBP12.1□□□□□ -0.47
NUP188-211ENST00000550219 ADGRE4PQ86SQ3 457 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 SERPINA11Q86U17 422 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 DEFB107AQ8IZN7 70 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 CNEP1R1Q8N9A8 125 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 OR5M1Q8NGP8 315 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 ADAMTS15Q8TE58 950 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 SMPDL3BQ92485 455 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 OR7D2Q96RA2 312 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 BTBD10Q9BSF8 475 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 OR51I1Q9H343 314 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 SPAG4Q9NPE6 437 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 THUMPD1Q9NXG2 353 aaKnown RBP12.1□□□□□ -0.47
NUP188-211ENST00000550219 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
NUP188-211ENST00000550219 A0A1W2PNV4 684 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 PRAMEF27A3QJZ7 478 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 H3BML4 177 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 DNAJA2O60884 412 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 ATE1O95260 518 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 AGR2O95994 175 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 OR12D1P0DN82 309 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 CHMP24386 653 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 GABRA3P34903 492 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 CRATP43155 626 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 GAS1P54826 345 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 CASP9P55211 416 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
NUP188-211ENST00000550219 EEFSECP57772 596 aaKnown RBP12.09□□□□□ -0.47
NUP188-211ENST00000550219 ADRM1Q16186 407 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 ZSCAN26Q16670 478 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 DEFB113Q30KQ7 82 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 CYP27C1Q4G0S4 372 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 DNAL1Q4LDG9 190 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 PPP4R4Q6NUP7 873 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 VWA1Q6PCB0 445 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 PTOV1Q86YD1 416 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 ARHGAP24Q8N264 748 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 MEIOBQ8N635 442 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 OR2M3Q8NG83 312 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 OR5D16Q8NGK9 328 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 OR10A6Q8NH74 314 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 FAM110BQ8TC76 370 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 SLC9A6Q92581 669 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 DOCK7Q96N67 2140 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 ZNF583Q96ND8 569 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 CDRT15Q96T59 188 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 ECSITQ9BQ95 431 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 SPATA9Q9BWV2 254 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 BTBD2Q9BX70 525 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 LRMDAQ9H2I8 198 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 PIGMQ9H3S5 423 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 TMEM38AQ9H6F2 299 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 Q9N2J8 555 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 MED11Q9P086 117 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 CD300AQ9UGN4 299 aa12.09□□□□□ -0.47
NUP188-211ENST00000550219 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 GXYLT2A0PJZ3 443 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 PRORSD1PA6NEY8 169 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 H0YC42 278 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 CASKO14936 926 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 GYG2O15488 501 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 HCRTR2O43614 444 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 RRP9O43818 475 aaKnown RBP12.08□□□□□ -0.48
NUP188-211ENST00000550219 ZIC3O60481 467 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 TNFSF13O75888 250 aa12.08□□□□□ -0.48
NUP188-211ENST00000550219 AK1P00568 194 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms