RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 C9JVG2 144 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 NPIPA2E9PIF3 369 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 KIR2DS3K7RE56 304 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 SGK494L7N484 410 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 SDHDO14521 159 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 DVL1O14640 695 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 TNFRSF13BO14836 293 aaPredicted RBP4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 NEURL1O76050 574 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 UMPSP11172 480 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 GM2AP17900 193 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 CRABP2P29373 138 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 OTX1P32242 354 aaPredicted RBP4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 APOBEC1P41238 236 aaKnown RBP4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 NPY2RP49146 381 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 GLUD2P49448 558 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 CTSCP53634 463 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 RGS8P57771 180 aaPredicted RBP4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 KCNK10P57789 538 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 SELENOVP59797 346 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 FKBP1BP68106 108 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 KDSRQ06136 332 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 MED21Q13503 144 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 VEZF1Q14119 521 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 HSDL1Q3SXM5 330 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 STEAP4Q687X5 459 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 PYHIN1Q6K0P9 492 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 RGMBQ6NW40 437 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 ZNF704Q6ZNC4 412 aaPredicted RBP4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 MICU2Q8IYU8 434 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 ST13P4Q8IZP2 240 aaPredicted RBP4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 KIRREL3Q8IZU9 778 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 PYROXD2Q8N2H3 581 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 PQLC3Q8N755 202 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 BMPERQ8N8U9 685 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 CATSPER1Q8NEC5 780 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 RDH11Q8TC12 318 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 M1APQ8TC57 530 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 CD300LFQ8TDQ1 290 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 GPX8Q8TED1 209 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 SLC35F5Q8WV83 523 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 NEUROG1Q92886 237 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 TAAR8Q969N4 342 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 LMLNQ96KR4 655 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 SGK494Q96LW2 274 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 PPP1R2P1Q96PQ5 205 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 PEBP4Q96S96 227 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 RBM24Q9BX46 236 aaKnown RBP4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 ANKRD60Q9BZ19 345 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 PRRG4Q9BZD6 226 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 YIPF3Q9GZM5 350 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 NMUR2Q9GZQ4 415 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 IL22Q9GZX6 179 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 ZNF160Q9HCG1 818 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 MRPL40Q9NQ50 206 aaKnown RBP4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 C1RLQ9NZP8 487 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 BFARQ9NZS9 450 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 PIPOXQ9P0Z9 390 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 P2RX2Q9UBL9 471 aa4.54□□□□□ -1.68
ATP2B1-206ENST00000549727 COL11A1P12107 1806 aaPredicted RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 COL4A5P29400 1685 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 RLFQ13129 1914 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 RNF222A6NCQ9 220 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 OR6C65A6NJZ3 312 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 SNTNA6NMZ2 147 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 ABCD4O14678 606 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 B4GALT5O43286 388 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 SPINT2O43291 252 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 PLIN3O60664 434 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 LDB3O75112 727 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 GRAP2O75791 330 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 NDUFA7O95182 113 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 EGFP01133 1207 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 C1QAP02745 245 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 RAF1P04049 648 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 HIST1H2AGP0C0S8 130 aaPredicted RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 THRAP10827 490 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 IRF2P14316 349 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 POU2F1P14859 743 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 DCTDP32321 178 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 MATKP42679 507 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 RPL34P49207 117 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 CSNK1EP49674 416 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 SERPINB8P50452 374 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 NR0B1P51843 470 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 KPNA2P52292 529 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 THOP1P52888 689 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 SEC61GP60059 68 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 ABCE1P61221 599 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 HERV-K104P63124 156 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 FOXM1Q08050 763 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 ZNF177Q13360 481 aaPredicted RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 PRPSAP1Q14558 356 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 ZSWIM7Q19AV6 140 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 SLC25A52Q3SY17 297 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 TEX44Q53QW1 395 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 N4BP2L1Q5TBK1 243 aaPredicted RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 MLIPQ5VWP3 458 aa4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 ZNF324BQ6AW86 544 aaPredicted RBP4.53□□□□□ -1.68
ATP2B1-206ENST00000549727 RFWD3Q6PCD5 774 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms