RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.61□□□□□ -0.07
SSH1-208ENST00000548522 TRPM8Q7Z2W7 1104 aa14.61□□□□□ -0.07
SSH1-208ENST00000548522 HIPK1Q86Z02 1210 aa14.61□□□□□ -0.07
SSH1-208ENST00000548522 B4GALNT2Q8NHY0 566 aa14.61□□□□□ -0.07
SSH1-208ENST00000548522 KISS1RQ969F8 398 aaPredicted RBP14.61□□□□□ -0.07
SSH1-208ENST00000548522 ZBED6CLQ96FA7 236 aaPredicted RBP14.61□□□□□ -0.07
SSH1-208ENST00000548522 ESRP2Q9H6T0 727 aaKnown RBP14.61□□□□□ -0.07
SSH1-208ENST00000548522 TTC36A6NLP5 189 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 NPIPB8E9PQR5 432 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 TROVE2P10155 538 aaKnown RBP eCLIP14.6□□□□□ -0.07
SSH1-208ENST00000548522 SDC1P18827 310 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 ENPP1P22413 925 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 MANFP55145 182 aaKnown RBP14.6□□□□□ -0.07
SSH1-208ENST00000548522 TOMM34Q15785 309 aaPredicted RBP14.6□□□□□ -0.07
SSH1-208ENST00000548522 VPS26BQ4G0F5 336 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 EXOSC6Q5RKV6 272 aaKnown RBP14.6□□□□□ -0.07
SSH1-208ENST00000548522 ATG16L1Q676U5 607 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 FRMD7Q6ZUT3 714 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 FCRLAQ7L513 359 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 COX18Q8N8Q8 333 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 OR2T11Q8NH01 316 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 PIWIL2Q8TC59 973 aaKnown RBP14.6□□□□□ -0.07
SSH1-208ENST00000548522 JADE3Q92613 823 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 C7orf26Q96N11 449 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 TSSK3Q96PN8 268 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 SIKE1Q9BRV8 207 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 TRAF4Q9BUZ4 470 aaPredicted RBP14.6□□□□□ -0.07
SSH1-208ENST00000548522 POTEKPQ9BYX7 375 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 MANSC1Q9H8J5 431 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 UBQLN4Q9NRR5 601 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 GIN1Q9NXP7 522 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 NTMQ9P121 344 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 PRSS50Q9UI38 385 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 MID2Q9UJV3 735 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 ING1Q9UK53 422 aaPredicted RBP14.6□□□□□ -0.07
SSH1-208ENST00000548522 USH1CQ9Y6N9 552 aa14.6□□□□□ -0.07
SSH1-208ENST00000548522 FREM1Q5H8C1 2179 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 IGHV4-30-2A0A087WSY4 118 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 A0A096LNT2 108 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 SCDO00767 359 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 TLX2O43763 284 aaPredicted RBP14.59□□□□□ -0.07
SSH1-208ENST00000548522 SEC22BO75396 215 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 CRCPO75575 148 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 DCTN3O75935 186 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 LYZL6O75951 148 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 ALDH3A1P30838 453 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 C21orf58P58505 322 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 RNPS1Q15287 305 aaKnown RBP14.59□□□□□ -0.07
SSH1-208ENST00000548522 STK11Q15831 433 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.59□□□□□ -0.071e-7■■■■■ 48
SSH1-208ENST00000548522 PDSS1Q5T2R2 415 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 CGB2Q6NT52 195 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 ZYG11AQ6WRX3 759 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 BHLHA15Q7RTS1 189 aaPredicted RBP14.59□□□□□ -0.07
SSH1-208ENST00000548522 LSRQ86X29 649 aaPredicted RBP14.59□□□□□ -0.07
SSH1-208ENST00000548522 ATP6V1C2Q8NEY4 427 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 FBXO27Q8NI29 283 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 HSD17B8Q92506 261 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 CPNE4Q96A23 557 aaPredicted RBP14.59□□□□□ -0.07
SSH1-208ENST00000548522 PPCDCQ96CD2 204 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 PAIP2Q9BPZ3 127 aaKnown RBP14.59□□□□□ -0.07
SSH1-208ENST00000548522 HDHD5Q9BXW7 423 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 C12orf65Q9H3J6 166 aaKnown RBP14.59□□□□□ -0.07
SSH1-208ENST00000548522 CXorf36Q9H7Y0 433 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 NPAP1Q9NZP6 1156 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 SLC17A7Q9P2U7 560 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 BAIAP2L1Q9UHR4 511 aa14.59□□□□□ -0.07
SSH1-208ENST00000548522 WBP11Q9Y2W2 641 aaKnown RBP14.59□□□□□ -0.07
SSH1-208ENST00000548522 SHISA9B4DS77 424 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 C9JVG2 144 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 DNAJC8O75937 253 aaPredicted RBP14.58□□□□□ -0.08
SSH1-208ENST00000548522 HPGDP15428 266 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 ELK4P28324 431 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 FRKP42685 505 aaPredicted RBP14.58□□□□□ -0.08
SSH1-208ENST00000548522 ITGADQ13349 1161 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 PDE7AQ13946 482 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 TMEM176BQ3YBM2 270 aaPredicted RBP14.58□□□□□ -0.08
SSH1-208ENST00000548522 CCDC153Q494R4 210 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 GALNTL6Q49A17 601 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 GTF2IRD2BQ6EKJ0 949 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 PODNL1Q6PEZ8 512 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 GTF2IRD2Q86UP8 949 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 MISPQ8IVT2 679 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 OR6Y1Q8NGX8 325 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 CEP70Q8NHQ1 597 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 PHOSPHO1Q8TCT1 267 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 HTRA1Q92743 480 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 CDS1Q92903 461 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 ZNF775Q96BV0 537 aaPredicted RBP14.58□□□□□ -0.08
SSH1-208ENST00000548522 FAM120BQ96EK7 910 aaKnown RBP14.58□□□□□ -0.08
SSH1-208ENST00000548522 REXO5Q96IC2 774 aaKnown RBP14.58□□□□□ -0.08
SSH1-208ENST00000548522 FCRL1Q96LA6 429 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 HS6ST2Q96MM7 605 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 REEP4Q9H6H4 257 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 LRTM1Q9HBL6 345 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 SIRT3Q9NTG7 399 aaPredicted RBP14.58□□□□□ -0.08
SSH1-208ENST00000548522 SH3BP4Q9P0V3 963 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 CARD8Q9Y2G2 431 aa14.58□□□□□ -0.08
SSH1-208ENST00000548522 A0A1W2PNR3 127 aa14.57□□□□□ -0.08
SSH1-208ENST00000548522 A0A1W2PQD3 144 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms