RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 RNLSQ5VYX0 342 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 RESP18Q5W5W9 173 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ZNF470Q6ECI4 717 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 TRIM40Q6P9F5 258 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 DOK6Q6PKX4 331 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 TMEM220Q6QAJ8 160 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 SMARCD3Q6STE5 483 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ENPP6Q6UWR7 440 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 FOXL2NBQ6ZUU3 175 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ESPNLQ6ZVH7 1005 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 FAM122BQ7Z309 247 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 PIWIL4Q7Z3Z4 852 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 MTERF4Q7Z6M4 381 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 TRIM73Q86UV7 250 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 PLCZ1Q86YW0 608 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ARMC8Q8IUR7 673 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 TRIM59Q8IWR1 403 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 PDZD9Q8IXQ8 264 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 SLC43A2Q8N370 569 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 CELF2-AS1Q8N7Q2 184 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 FAM71CQ8NEG0 241 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 IL17RDQ8NFM7 739 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 OR56A3Q8NH54 315 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 B4GALNT2Q8NHY0 566 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 PPP1R35Q8TAP8 253 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ZNF398Q8TD17 642 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ATL1Q8WXF7 558 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 LRTOMTQ8WZ04 291 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 BCL2L2Q92843 193 aaPredicted RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 EXT2Q93063 718 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 CPNE4Q96A23 557 aaPredicted RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 PPWD1Q96BP3 646 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 PPP1R2P1Q96PQ5 205 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 SLC38A2Q96QD8 506 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ZNF670Q9BS34 389 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 TMEM70Q9BUB7 260 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 OSBPL11Q9BXB4 747 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ZNF717Q9BY31 904 aaPredicted RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 LRRC2Q9BYS8 371 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ZNF350Q9GZX5 532 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 RAB6CQ9H0N0 254 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 MYLK2Q9H1R3 596 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 DPAGT1Q9H3H5 408 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 GSTO2Q9H4Y5 243 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 CXorf36Q9H7Y0 433 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 HAUS2Q9NVX0 235 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 NSMCE4AQ9NXX6 385 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 GRHL1Q9NZI5 618 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 SLC17A7Q9P2U7 560 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 CD84Q9UIB8 345 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ACAD8Q9UKU7 415 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 SLC6A5Q9Y345 797 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 CEP83Q9Y592 693 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 KPTNQ9Y664 436 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 CNOT1A5YKK6 2376 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 USF3Q68DE3 2245 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 MED12LQ86YW9 2145 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 MDC1Q14676 2089 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 NDUFAF8A1L188 74 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 BTNL10A8MVZ5 291 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 EEF1E1-BLOC1S5C9J1V9 151 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 FBP2O00757 339 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ABCD4O14678 606 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 POLR3GO15318 223 aaPredicted RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 EEF1E1O43324 174 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 CHST10O43529 356 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 B4GALT2O60909 372 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 SKAP2O75563 359 aaPredicted RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 CDK14O94921 469 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ETHE1O95571 254 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 LY86O95711 162 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 MOCS2O96007 188 aaPredicted RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 ADAP00813 363 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 IGHV3-13P01766 116 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 RBP4P02753 201 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ATP1B1P05026 303 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 LIPFP07098 398 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 YES1P07947 543 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 SERPINA6P08185 405 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 FRMD6-AS1P0C7T7 363 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 CD28P10747 220 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ENO3P13929 434 aaPredicted RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 CYP11B1P15538 503 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 SLC9A1P19634 815 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 COL8A2P25067 703 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 AZGP1P25311 298 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 FKBP2P26885 142 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 IL1R2P27930 398 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 PDHA2P29803 388 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 ECHS1P30084 290 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 PPP2R1BP30154 601 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 PSMB10P40306 273 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 CLK1P49759 484 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 MXI1P50539 228 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 PNLIPRP2P54317 469 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 NAP1L1P55209 391 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 SH3BGRP55822 239 aaPredicted RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 RPL23AP62750 156 aaKnown RBP0.27□□□□□ -2.37
CEP290-203ENST00000547691 CTAG1AP78358 180 aa0.27□□□□□ -2.37
CEP290-203ENST00000547691 KCNJ10P78508 379 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms