RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 C17orf67Q0P5P2 114 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 STX5Q13190 355 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 PDCD2Q16342 344 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 BCL2A1Q16548 175 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 DUSP5Q16690 384 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 GRAMD1BQ3KR37 738 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 LSM12Q3MHD2 195 aaKnown RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 GLYR1Q49A26 553 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 RAET1LQ5VY80 246 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 OR5M10Q6IEU7 315 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 CD300LDQ6UXZ3 194 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 RIMKLAQ8IXN7 391 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 KRTCAP2Q8N6L1 136 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 COX18Q8N8Q8 333 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 SLC16A11Q8NCK7 471 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 GOT1L1Q8NHS2 421 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 FBXO30Q8TB52 745 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 FAM110BQ8TC76 370 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 SFXN5Q8TD22 340 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 OR5P2Q8WZ92 322 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 SLC9A6Q92581 669 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 JADE3Q92613 823 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 RNASE6Q93091 150 aaKnown RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 MOAP1Q96BY2 351 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 COQ8BQ96D53 544 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 C1GALT1C1Q96EU7 318 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 SORT1Q99523 831 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 TUBA1CQ9BQE3 449 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 ZNF559Q9BR84 538 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 BTBD2Q9BX70 525 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 RTN4RQ9BZR6 473 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 DSN1Q9H410 356 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 A0A1W2PQD3 144 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 WDR91A4D1P6 747 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 SYT5O00445 386 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 ERLIN1O75477 346 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 RCBTB2O95199 551 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 OXSR1O95747 527 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-223ENST00000545440 ANGPTL1O95841 491 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 C6orf47O95873 294 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 TMIGD3P0DMS9 266 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-223ENST00000545440 G6PDP11413 515 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 PEPDP12955 493 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 FAHP16930 419 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 HK1P19367 917 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 EFNA1P20827 205 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-223ENST00000545440 TBXA2RP21731 343 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 BGNP21810 368 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 CTSSP25774 331 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 UQCRC1P31930 480 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 SLC1A6P48664 564 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 DGKQP52824 942 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 SLC18A1P54219 525 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 PRKAG1P54619 331 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 DLX5P56178 289 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 CLDN8P56748 225 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 EEFSECP57772 596 aaKnown RBP6.92□□□□□ -1.3
SNHG1-223ENST00000545440 EEF1A1P68104 462 aaKnown RBP6.92□□□□□ -1.3
SNHG1-223ENST00000545440 SORDQ00796 357 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 SRYQ05066 204 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 MYBPHQ13203 477 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 TP53BP2Q13625 1128 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 LASP1Q14847 261 aaKnown RBP6.92□□□□□ -1.3
SNHG1-223ENST00000545440 TMEM44Q2T9K0 475 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 EEF1A1P5Q5VTE0 462 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 CDC73Q6P1J9 531 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 BHLHB9Q6PI77 547 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 ARSKQ6UWY0 536 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 APOOLQ6UXV4 268 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 MARCH3Q86UD3 253 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 GRAMD2AQ8IUY3 354 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 MISPQ8IVT2 679 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 C9orf106Q8NAJ2 232 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 OR8J2Q8NGG1 315 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 DIRC2Q96SL1 478 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 PIGQQ9BRB3 760 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 DUSP26Q9BV47 211 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 ACTRT3Q9BYD9 372 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 C20orf27Q9GZN8 174 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 PIGUQ9H490 435 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 UBQLN4Q9NRR5 601 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 JKAMPQ9P055 326 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 MED11Q9P086 117 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 RPH3AQ9Y2J0 694 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-223ENST00000545440 SNX8Q9Y5X2 465 aa6.92□□□□□ -1.3
SNHG1-223ENST00000545440 DSCAMO60469 2012 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 TACC2O95359 2948 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 A0A087WZY1 265 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 TMEM120BA0PK00 339 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 OR2M5A3KFT3 312 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 SLC22A20A6NK97 555 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 EEF1E1-BLOC1S5C9J1V9 151 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 RNASET2O00584 256 aaKnown RBP6.91□□□□□ -1.3
SNHG1-223ENST00000545440 EEF1E1O43324 174 aaKnown RBP6.91□□□□□ -1.3
SNHG1-223ENST00000545440 CYP7B1O75881 506 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 CRHP06850 196 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 FCGR2AP12318 317 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 HPGDP15428 266 aa6.91□□□□□ -1.3
SNHG1-223ENST00000545440 TCEA1P23193 301 aaKnown RBP6.91□□□□□ -1.3
SNHG1-223ENST00000545440 SDHAP31040 664 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms