RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 TLDC2A0PJX2 215 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 ETV2O00321 342 aaPredicted RBP12.54□□□□□ -0.4
DDX11-228ENST00000545115 ZNF264O43296 627 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 EIF4E2O60573 245 aaKnown RBP12.54□□□□□ -0.4
DDX11-228ENST00000545115 SLU7O95391 586 aaKnown RBP12.54□□□□□ -0.4
DDX11-228ENST00000545115 DANCRP0C864 163 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 UBL4AP11441 157 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 PRPS1L1P21108 318 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 ENPP1P22413 925 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 SERPINB5P36952 375 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 CCR4P51679 360 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 RAC3P60763 192 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 ITGADQ13349 1161 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 TNK1Q13470 666 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 CBFBQ13951 182 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 CAPRIN1Q14444 709 aaKnown RBP12.54□□□□□ -0.4
DDX11-228ENST00000545115 NDUFAF6Q330K2 333 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 SLC25A53Q5H9E4 307 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 C6orf136Q5SQH8 315 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 IL23RQ5VWK5 629 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 C3orf33Q6P1S2 294 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 BHLHB9Q6PI77 547 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 ZCCHC23Q6ZST2 131 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 Q6ZT83 130 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 ZNF619Q8N2I2 560 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 RIBC1Q8N443 379 aaPredicted RBP12.54□□□□□ -0.4
DDX11-228ENST00000545115 KRTCAP2Q8N6L1 136 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 ATP6V1C2Q8NEY4 427 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 OR5W2Q8NH69 310 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 OR5AK3PQ8NH89 298 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 LILRB1Q8NHL6 650 aaPredicted RBP12.54□□□□□ -0.4
DDX11-228ENST00000545115 RFWD2Q8NHY2 731 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDX11-228ENST00000545115 COQ8BQ96D53 544 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 PSD2Q9BQI7 771 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 BHLHE41Q9C0J9 482 aaPredicted RBP12.54□□□□□ -0.4
DDX11-228ENST00000545115 L2HGDHQ9H9P8 463 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 BCO1Q9HAY6 547 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 SLC17A7Q9P2U7 560 aa12.54□□□□□ -0.4
DDX11-228ENST00000545115 IGHV3-15A0A0B4J1V0 119 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 ZNF814B7Z6K7 855 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 OVOL3O00110 214 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 CFLARO15519 480 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
DDX11-228ENST00000545115 SOD3P08294 240 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 SOAT1P35610 550 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 OR3A2P47893 321 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 VEZF1Q14119 521 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 QPRTQ15274 297 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 CLEC12BQ2HXU8 276 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 ZNF672Q499Z4 452 aaPredicted RBP12.53□□□□□ -0.4
DDX11-228ENST00000545115 BHLHA15Q7RTS1 189 aaPredicted RBP12.53□□□□□ -0.4
DDX11-228ENST00000545115 RIMKLAQ8IXN7 391 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 OR5D16Q8NGK9 328 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 PIWIL2Q8TC59 973 aaKnown RBP12.53□□□□□ -0.4
DDX11-228ENST00000545115 SMAP2Q8WU79 429 aaPredicted RBP12.53□□□□□ -0.4
DDX11-228ENST00000545115 GTPBP3Q969Y2 492 aaKnown RBP12.53□□□□□ -0.4
DDX11-228ENST00000545115 ARL8AQ96BM9 186 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 C3orf30Q96M34 536 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 OR7D2Q96RA2 312 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 DUSP26Q9BV47 211 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 NMUR2Q9GZQ4 415 aa12.53□□□□□ -0.4
DDX11-228ENST00000545115 ING1Q9UK53 422 aaPredicted RBP12.53□□□□□ -0.4
DDX11-228ENST00000545115 A0A1W2PP18 115 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 SERINC4A6NH21 518 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 DUXAA6NLW8 204 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 ESPNB1AK53 854 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 AK1P00568 194 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 ARRB2P32121 409 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 HBA1P69905 142 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 BSPH1Q075Z2 132 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 RASGEF1BQ0VAM2 473 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 MAD2L1Q13257 205 aaPredicted RBP12.52□□□□□ -0.41
DDX11-228ENST00000545115 SKP2Q13309 424 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 TIGD2Q4W5G0 525 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 PDZK1Q5T2W1 519 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 SEZ6L2Q6UXD5 910 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 ATG4DQ86TL0 474 aaPredicted RBP12.52□□□□□ -0.41
DDX11-228ENST00000545115 KBTBD8Q8NFY9 601 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 OR2W6PQ8NHA6 318 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 TCP10LQ8TDR4 215 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 NEUROG1Q92886 237 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 ZNF524Q96C55 264 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 SDF2Q99470 211 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 MDFIQ99750 246 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 ZDHHC2Q9UIJ5 367 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
DDX11-228ENST00000545115 MAGED1Q9Y5V3 778 aaPredicted RBP12.52□□□□□ -0.41
DDX11-228ENST00000545115 ZNF724A8MTY0 619 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 SMAD9O15198 467 aaKnown RBP12.51□□□□□ -0.41
DDX11-228ENST00000545115 CYTIPO60759 359 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 DNAJA2O60884 412 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 SPAG7O75391 227 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 CRLF1O75462 422 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 STX11O75558 287 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 LYZL6O75951 148 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 FESP07332 822 aa12.51□□□□□ -0.41
DDX11-228ENST00000545115 G6PDP11413 515 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms