RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 PCDHGB5Q9Y5G0 923 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 HEATR5AQ86XA9 2040 aa27.83■■■□□ 2.05
CCM2-219ENST00000544363 SSR4P51571 173 aa27.82■■■□□ 2.04
CCM2-219ENST00000544363 ALG10BQ5I7T1 473 aa27.82■■■□□ 2.04
CCM2-219ENST00000544363 H3F3CQ6NXT2 135 aa27.82■■■□□ 2.04
CCM2-219ENST00000544363 PRICKLE2Q7Z3G6 844 aa27.82■■■□□ 2.04
CCM2-219ENST00000544363 OR10G3Q8NGC4 313 aa27.82■■■□□ 2.04
CCM2-219ENST00000544363 PIGXQ8TBF5 258 aa27.82■■■□□ 2.04
CCM2-219ENST00000544363 DCDC2BA2VCK2 349 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 OR6B1O95007 311 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 WBP2NLQ6ICG8 309 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 KRT80Q6KB66 452 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 UGT2A3Q6UWM9 527 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 CD300LDQ6UXZ3 194 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 RNF113BQ8IZP6 322 aaKnown RBP27.81■■■□□ 2.04
CCM2-219ENST00000544363 DNAJA4Q8WW22 397 aaPredicted RBP27.81■■■□□ 2.04
CCM2-219ENST00000544363 TMEM239Q8WW34 195 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 ASB15Q8WXK1 588 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 MPP4Q96JB8 637 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 MUS81Q96NY9 551 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 SELENONQ9NZV5 590 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 ICAM5Q9UMF0 924 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 E9PQ18 207 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 BCKDKO14874 412 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 LIFP15018 202 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 EPHA2P29317 976 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 IDH2P48735 452 aaKnown RBP27.81■■■□□ 2.04
CCM2-219ENST00000544363 COX10Q12887 443 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 SWT1Q5T5J6 900 aaKnown RBP27.81■■■□□ 2.04
CCM2-219ENST00000544363 NRMQ8IXM6 262 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 GNPDA2Q8TDQ7 276 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 DUSP19Q8WTR2 217 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 HS6ST2Q96MM7 605 aa27.81■■■□□ 2.04
CCM2-219ENST00000544363 C17orf51A8MQB3 221 aa27.8■■■□□ 2.04
CCM2-219ENST00000544363 TP53I11O14683 189 aa27.8■■■□□ 2.04
CCM2-219ENST00000544363 OMPP47874 163 aa27.8■■■□□ 2.04
CCM2-219ENST00000544363 GAS1P54826 345 aa27.8■■■□□ 2.04
CCM2-219ENST00000544363 KEAP1Q14145 624 aa27.8■■■□□ 2.04
CCM2-219ENST00000544363 DND1Q8IYX4 353 aaKnown RBP27.8■■■□□ 2.04
CCM2-219ENST00000544363 OR5W2Q8NH69 310 aa27.8■■■□□ 2.04
CCM2-219ENST00000544363 REV1Q9UBZ9 1251 aa27.8■■■□□ 2.04
CCM2-219ENST00000544363 P2RX1P51575 399 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 ESRRGP62508 458 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 C17orf67Q0P5P2 114 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 IL18R1Q13478 541 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 IL20RBQ6UXL0 311 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 LINC00114Q6XXX2 140 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 GATA6Q92908 595 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 C3orf49Q96BT1 292 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 GPA33Q99795 319 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 KRCC1Q9NPI7 259 aaPredicted RBP27.79■■■□□ 2.04
CCM2-219ENST00000544363 KLRF1Q9NZS2 232 aa27.79■■■□□ 2.04
CCM2-219ENST00000544363 NDRG4Q9ULP0 352 aaKnown RBP27.79■■■□□ 2.04
CCM2-219ENST00000544363 PIP5K1CO60331 668 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 OSMP13725 252 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 GSTM3P21266 225 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 SDHBP21912 280 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 ITPKBP27987 946 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 RBM34P42696 430 aaKnown RBP27.78■■■□□ 2.04
CCM2-219ENST00000544363 CHN2P52757 468 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 RPP38P78345 283 aaKnown RBP27.78■■■□□ 2.04
CCM2-219ENST00000544363 DCAF10Q5QP82 559 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 JMJD6Q6NYC1 403 aaPredicted RBP27.78■■■□□ 2.04
CCM2-219ENST00000544363 C8orf59Q8N0T1 100 aaPredicted RBP27.78■■■□□ 2.04
CCM2-219ENST00000544363 B4GALNT2Q8NHY0 566 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 BRIX1Q8TDN6 353 aaKnown RBP27.78■■■□□ 2.04
CCM2-219ENST00000544363 FAM46AQ96IP4 442 aaKnown RBP27.78■■■□□ 2.04
CCM2-219ENST00000544363 KLHDC3Q9BQ90 382 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 ZNF426Q9BUY5 554 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 METTL7AQ9H8H3 244 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 GMPPBQ9Y5P6 360 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 PGCP20142 388 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 PTGDSP41222 190 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 GSSP48637 474 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 RPS6KA3P51812 740 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 CBFBQ13951 182 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 ZNF691Q5VV52 312 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 BICRALQ6AI39 1079 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 TMEM156Q8N614 296 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 SIRT6Q8N6T7 355 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 ZNF563Q8TA94 476 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 THOC3Q96J01 351 aaKnown RBP27.78■■■□□ 2.04
CCM2-219ENST00000544363 PITX2Q99697 317 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 GALNT9Q9HCQ5 603 aa27.78■■■□□ 2.04
CCM2-219ENST00000544363 CHCHD2Q9Y6H1 151 aaPredicted RBP27.78■■■□□ 2.04
CCM2-219ENST00000544363 ST13P50502 369 aaKnown RBP27.77■■■□□ 2.04
CCM2-219ENST00000544363 TPD52P55327 224 aaPredicted RBP27.77■■■□□ 2.04
CCM2-219ENST00000544363 TSPAN31Q12999 210 aa27.77■■■□□ 2.04
CCM2-219ENST00000544363 PSMF1Q92530 271 aa27.77■■■□□ 2.04
CCM2-219ENST00000544363 HRASLS5Q96KN8 279 aa27.77■■■□□ 2.04
CCM2-219ENST00000544363 CCNL2Q96S94 520 aaPredicted RBP27.77■■■□□ 2.04
CCM2-219ENST00000544363 SECISBP2Q96T21 854 aaKnown RBP27.77■■■□□ 2.04
CCM2-219ENST00000544363 PNPLA3Q9NST1 481 aa27.77■■■□□ 2.04
CCM2-219ENST00000544363 MED31Q9Y3C7 131 aa27.77■■■□□ 2.04
CCM2-219ENST00000544363 GMFGO60234 142 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 PTNP21246 168 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 CASP3P42574 277 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 CRISP1P54107 249 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 PRKCDQ05655 676 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 THAP5Q7Z6K1 395 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms