RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 DYRK3O43781 588 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 LDOC1O95751 146 aaPredicted RBP12.54□□□□□ -0.4
HCFC2-202ENST00000544223 GRK5P34947 590 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 ETV5P41161 510 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 GPR143P51810 404 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 RPS6KA3P51812 740 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 PLCXD2Q0VAA5 305 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 SQSTM1Q13501 440 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 MED22Q15528 200 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 RABEPKQ7Z6M1 372 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 OR7G1Q8NGA0 311 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 DAZLQ92904 295 aaKnown RBP12.54□□□□□ -0.4
HCFC2-202ENST00000544223 OMA1Q96E52 524 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
HCFC2-202ENST00000544223 TNFRSF13CQ96RJ3 184 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 NPAS1Q99742 590 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 CRB3Q9BUF7 120 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 ULBP3Q9BZM4 244 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 OR52D1Q9H346 318 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 TESQ9UGI8 421 aaKnown RBP12.54□□□□□ -0.4
HCFC2-202ENST00000544223 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 SPTBN2O15020 2390 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 PCNX2A6NKB5 2137 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 B4DXG7 233 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 GTPBP1O00178 669 aaKnown RBP12.54□□□□□ -0.4
HCFC2-202ENST00000544223 SERPINI2O75830 405 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 ADORA3P0DMS8 318 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 CLUP10909 449 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 FPR3P25089 353 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 IL12BP29460 328 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 CD79BP40259 229 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 FBXW4P57775 412 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 NCS1P62166 190 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 RPS18P62269 152 aaKnown RBP12.54□□□□□ -0.4
HCFC2-202ENST00000544223 COX10Q12887 443 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 CD300LDQ6UXZ3 194 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 BMPERQ8N8U9 685 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 CYB561A3Q8NBI2 242 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 NDNFQ8TB73 568 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 FANK1Q8TC84 345 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 GALNT9Q9HCQ5 603 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.54□□□□□ -0.4
HCFC2-202ENST00000544223 B3GALT1Q9Y5Z6 326 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 AKAP13Q12802 2813 aa12.54□□□□□ -0.4
HCFC2-202ENST00000544223 UNC119BA6NIH7 251 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 SCDO00767 359 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 SOCS6O14544 535 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 CDX4O14627 284 aaPredicted RBP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 HCRTR2O43614 444 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 IL33O95760 270 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 GYPBP06028 91 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 DBTP11182 482 aaKnown RBP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 TBXA2RP21731 343 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 SMSP52788 366 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 EMP2P54851 167 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 RNF4P78317 190 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF117Q03924 483 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 PAPD4Q6PIY7 484 aaKnown RBP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 RASSF6Q6ZTQ3 369 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 GALNT6Q8NCL4 622 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 WDR36Q8NI36 951 aaKnown RBP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF578Q96N58 590 aaPredicted RBP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 WDR77Q9BQA1 342 aaPredicted RBP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF559Q9BR84 538 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 UBQLN3Q9H347 655 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 RERGLQ9H628 205 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 SLC25A19Q9HC21 320 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 UBQLN4Q9NRR5 601 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 FKBP14Q9NWM8 211 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 ZNF318Q5VUA4 2279 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 CDC40O60508 579 aaKnown RBP eCLIP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 NUDT14O95848 222 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 ITPKBP27987 946 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 SOX3P41225 446 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 RPS3AP61247 264 aaKnown RBP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 LSAMPQ13449 338 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.53□□□□□ -0.4
HCFC2-202ENST00000544223 OVCH1Q7RTY7 1134 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 SLC34A3Q8N130 599 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 OR8J1Q8NGP2 316 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 OR14A16Q8NHC5 309 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 MR1Q95460 341 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 POLE3Q9NRF9 147 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 PTTG2Q9NZH5 202 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 RPS6KB2Q9UBS0 482 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 MED31Q9Y3C7 131 aa12.53□□□□□ -0.4
HCFC2-202ENST00000544223 TRBV11-1A0A0K0K1C0 115 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 FRG2CA6NGY1 282 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 UBL4AP11441 157 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 IFNGR2P38484 337 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 ZFP36L1Q07352 338 aaKnown RBP12.52□□□□□ -0.4
HCFC2-202ENST00000544223 SKP2Q13309 424 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 INPP5JQ15735 1006 aaPredicted RBP12.52□□□□□ -0.4
HCFC2-202ENST00000544223 CTF1Q16619 201 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 C1QL3Q5VWW1 255 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 SLC29A4Q7RTT9 530 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 OR4F15Q8NGB8 312 aa12.52□□□□□ -0.4
HCFC2-202ENST00000544223 C3orf49Q96BT1 292 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms