RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 GOLGA8OA6NCC3 632 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 GOLGA8NF8WBI6 632 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 GTPBP1O00178 669 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 HMGN4O00479 90 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 KIAA0513O60268 411 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 ATE1O95260 518 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 PGRP06401 933 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 CD1EP15812 388 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 LOXP28300 417 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 S100A3P33764 101 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 SFTPDP35247 375 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 PGM1P36871 562 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 CDKN2CP42773 168 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 CARD18P57730 90 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 QPRTQ15274 297 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 GPR68Q15743 365 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 TMEM176BQ3YBM2 270 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 SLC9B1Q4ZJI4 515 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 TNFAIP8L2Q6P589 184 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 FRRS1Q6ZNA5 592 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 VPS37AQ8NEZ2 397 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 TOR1AIP2Q8NFQ8 470 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 OR6K3Q8NGY3 331 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 XAGE5Q8WWM1 108 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 ROBO4Q8WZ75 1007 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 RAB8BQ92930 207 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 ARL8AQ96BM9 186 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 ROPN1LQ96C74 230 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 MBD6Q96DN6 1003 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 MRGPRX4Q96LA9 322 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 SLC39A3Q9BRY0 314 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 MANSC1Q9H8J5 431 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 EXD2Q9NVH0 621 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 KLHL28Q9NXS3 571 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 NDRG3Q9UGV2 375 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 MCTS1Q9ULC4 181 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 PROCRQ9UNN8 238 aa11.71□□□□□ -0.53
TNFRSF1A-215ENST00000543359 ARID1AO14497 2285 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CCDC154A6NI56 674 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TRPC5OSA6NMA1 111 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 C16orf97H3BN30 126 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KLF11O14901 512 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ERLIN1O75477 346 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 THBDP07204 575 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 KITP10721 976 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 UBL4AP11441 157 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 POU2F1P14859 743 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CRYGSP22914 178 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ME2P23368 584 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CHRNEQ04844 493 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 POU4F3Q15319 338 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 MAPK11Q15759 364 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZNF239Q16600 458 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ATG16L1Q676U5 607 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 C16orf62Q7Z3J2 963 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RNF130Q86XS8 419 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZNF614Q8N883 585 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 OIT3Q8WWZ8 545 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 OR52B2Q96RD2 323 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SLC35A5Q9BS91 424 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 THUMPD3Q9BV44 507 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PRRG4Q9BZD6 226 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 POLE3Q9NRF9 147 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GLRX2Q9NS18 164 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SLC6A13Q9NSD5 602 aa11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ING1Q9UK53 422 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 NSD1Q96L73 2696 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SLCO1B7G3V0H7 640 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ADAM11O75078 769 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SYNGR4O95473 234 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 H6PDO95479 791 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 NUDT14O95848 222 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 AGR2O95994 175 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 DNASE1P24855 282 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 AGTR1P30556 359 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 MVDP53602 400 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SESN3P58005 492 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 CBFBQ13951 182 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 SYPL1Q16563 259 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 TIGD2Q4W5G0 525 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PDCD4Q53EL6 469 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 COX20Q5RI15 118 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 PDSS1Q5T2R2 415 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 AGBL2Q5U5Z8 902 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 STAC2Q6ZMT1 411 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 EIF3MQ7L2H7 374 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZNF550Q7Z398 422 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZNF619Q8N2I2 560 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 GLB1L3Q8NCI6 653 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 RFWD2Q8NHY2 731 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZFP90Q8TF47 636 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ABHD3Q8WU67 409 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ST8SIA1Q92185 356 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ZNF75CPQ92670 426 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 OR52E6Q96RD3 313 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 QRSL1Q9H0R6 528 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 ACER3Q9NUN7 267 aa11.69□□□□□ -0.54
TNFRSF1A-215ENST00000543359 NKIRAS1Q9NYS0 192 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms