RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 PRPS1L1P21108 318 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 NT5EP21589 574 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 NTSP30990 170 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 MPIP34949 423 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 FEN1P39748 380 aaKnown RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 NRG3P56975 720 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 IGLV3-21P80748 117 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 INAQ16352 499 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF750Q32MQ0 723 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 FBLN7Q53RD9 439 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 OGFOD2Q6N063 350 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 FAM180AQ6UWF9 173 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 PTCHD4Q6ZW05 846 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 MAVSQ7Z434 540 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 FAM9CQ8IZT9 166 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 LRRC25Q8N386 305 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 MORN4Q8NDC4 146 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 B3GNT7Q8NFL0 401 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 OR52M1Q8NGK5 317 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF671Q8TAW3 534 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ACTRT2Q8TDY3 377 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 PTPMT1Q8WUK0 201 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 KAT2AQ92830 837 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 PPCDCQ96CD2 204 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 THOC1Q96FV9 657 aaKnown RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 EGLN2Q96KS0 407 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ART5Q96L15 291 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 IMMP1LQ96LU5 166 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 WDR77Q9BQA1 342 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 SIKE1Q9BRV8 207 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 LHPPQ9H008 270 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CCDC134Q9H6E4 229 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 KCNK13Q9HB14 408 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 PALMDQ9NP74 551 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 LIN7CQ9NUP9 197 aaKnown RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 FGFR1OP2Q9NVK5 253 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ASIC5Q9NY37 505 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 COPS7AQ9UBW8 275 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 OSGIN1Q9UJX0 560 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CES1P1Q9UKY3 287 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 LOC400499M0QZD8 3231 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 A0A0G2JND7 137 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 A0A1W2PS29 197 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 GABRR3A8MPY1 467 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 M0QYG6 137 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 SCAMP2O15127 329 aaKnown RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 TGFAP01135 160 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ATP1B1P05026 303 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CELA2AP08217 269 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ITGAMP11215 1152 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 IDO1P14902 403 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 NCBP2P52298 156 aaKnown RBP eCLIP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 DIO3P55073 304 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CLDN8P56748 225 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 GABPB1Q06547 395 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 Q0VFX4 171 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 RAPSNQ13702 412 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 PTGR1Q14914 329 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 LSM12Q3MHD2 195 aaKnown RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 LINC00303Q3SY05 128 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 C1orf185Q5T7R7 199 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CPTPQ5TA50 214 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 AGAP7PQ5VUJ5 663 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ANKRD26P1Q6NSI1 321 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ELMOD2Q8IZ81 293 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 NHLRC2Q8NBF2 726 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 RBM15BQ8NDT2 890 aaKnown RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 OR7A2PQ8NGA2 310 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 PHOSPHO1Q8TCT1 267 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 SLC2A12Q8TD20 617 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 NCLNQ969V3 563 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 MTERF3Q96E29 417 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CNRIP1Q96F85 164 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CHMP6Q96FZ7 201 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 SENP5Q96HI0 755 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 RILPQ96NA2 401 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 AGAP4Q96P64 663 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 BBC3Q96PG8 261 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 OR52B2Q96RD2 323 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ZBTB18Q99592 522 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 EBF4Q9BQW3 602 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CCDC28BQ9BUN5 200 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 SLC25A23Q9BV35 468 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 DPY30Q9C005 99 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 OR8D2Q9GZM6 311 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 CTDSP1Q9GZU7 261 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 BCO1Q9HAY6 547 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 MMP25Q9NPA2 562 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 GPR83Q9NYM4 423 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 TAS2R7Q9NYW3 318 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 ATP6V1HQ9UI12 483 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 BAG5Q9UL15 447 aa4.7□□□□□ -1.66
CLIP1-217ENST00000543205 NOSIPQ9Y314 301 aaKnown RBP4.7□□□□□ -1.66
CLIP1-217ENST00000543205 FREM2Q5SZK8 3169 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 WDFY3Q8IZQ1 3526 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 TRBV11-1A0A0K0K1C0 115 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 TCRBV5S2A0A599 114 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ZSCAN5BA6NJL1 495 aa4.69□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF785A8K8V0 405 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms