RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 VSX2P58304 361 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 FOXK2Q01167 660 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 EIF2B5Q13144 721 aaKnown RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 COL9A2Q14055 689 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 GALEQ14376 348 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 EXOSC7Q15024 291 aaKnown RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TRAM1Q15629 374 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 BCL2A1Q16548 175 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 FIGNL1Q6PIW4 674 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 GPALPP1Q8IXQ4 340 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TMEFF1Q8IYR6 380 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RDH10Q8IZV5 341 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 LSMEM1Q8N8F7 131 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 OR52R1Q8NGF1 315 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SLC2A12Q8TD20 617 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ADAMTS18Q8TE60 1221 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 DCLRE1CQ96SD1 692 aaKnown RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ATF6BQ99941 703 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ALG8Q9BVK2 526 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TMED9Q9BVK6 235 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TRIM2Q9C040 744 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SEMA6CQ9H3T2 930 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RERGLQ9H628 205 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TRIM36Q9NQ86 728 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 NPDC1Q9NQX5 325 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 BABAM2Q9NXR7 383 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 HAO2Q9NYQ3 351 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 IL20RAQ9UHF4 553 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ARHGEF17Q96PE2 2063 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SPTY2D1-AS1A0A0U1RR47 76 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 CCDC182A6NF36 153 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 FAM183AA6NL82 134 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 PRR23D1E9PI22 279 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 GTPBP1O00178 669 aaKnown RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SLC19A2O60779 497 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 PTP4A3O75365 173 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 CCNKO75909 580 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 PRR23D2P0DMB1 279 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SLC2A5P22732 501 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 NUDT1P36639 197 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TAS2R43P59537 309 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SKP1P63208 163 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ACTC1P68032 377 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ACTA1P68133 377 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 IGLV3-21P80748 117 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TFF2Q03403 129 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 GAS6Q14393 721 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ZNHIT3Q15649 155 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SLC35F1Q5T1Q4 408 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 KIAA0895LQ68EN5 471 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 THSD4Q6ZMP0 1018 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TMEM91Q6ZNR0 172 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 KLBQ86Z14 1044 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 CAMKK1Q8N5S9 505 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 OR13C2Q8NGS9 318 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 OR6F1Q8NGZ6 308 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ZC3HAV1LQ96H79 300 aaKnown RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 NEDD4LQ96PU5 975 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TIMP4Q99727 224 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 HDHD5Q9BXW7 423 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TCEAL2Q9H3H9 227 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 PPP1R3EQ9H7J1 279 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TBC1D17Q9HA65 648 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 FOLH1BQ9HBA9 442 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ATP13A2Q9NQ11 1180 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 MEPEQ9NQ76 525 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF221Q9UK13 617 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RABL2BQ9UNT1 228 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RANBP2P49792 3224 aaKnown RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 A0A1B0GWA3 101 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SHISA3A0PJX4 238 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RIIAD1A6NNX1 92 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SGK494L7N484 410 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 OR10H2O60403 315 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RDH16O75452 317 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SAGP10523 405 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF3P17036 446 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 S1PR1P21453 382 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 F8A1P23610 371 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 DDOSTP39656 456 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 EVX1P49640 407 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 BPIFB3P59826 476 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 PSG6Q00889 435 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 POU4F2Q12837 409 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 CCINQ13939 588 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 CARTPTQ16568 116 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 PRTGQ2VWP7 1150 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 PYDC2Q56P42 97 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TMEM31Q5JXX7 168 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 LCN1P1Q5VSP4 162 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 RSBN1Q5VWQ0 802 aaPredicted RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ARHGAP11AQ6P4F7 1023 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 CNIH2Q6PI25 160 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 ZAR1Q86SH2 424 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 CMIPQ8IY22 773 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 TMEM99Q8N816 258 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 C19orf47Q8N9M1 422 aaKnown RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 SLC37A3Q8NCC5 494 aa6.05□□□□□ -1.44
PTPRO-208ENST00000542557 KCTD12Q96CX2 325 aaKnown RBP6.05□□□□□ -1.44
PTPRO-208ENST00000542557 MSANTD3Q96H12 275 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms