RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PPP1R3EQ9H7J1 279 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 FKRPQ9H9S5 495 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 POPDC2Q9HBU9 364 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 EML4Q9HC35 981 aaKnown RBP4.05□□□□□ -1.76
SNHG1-219ENST00000542112 MAN2C1Q9NTJ4 1040 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 GTSE1Q9NYZ3 720 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 CNOT2Q9NZN8 540 aaKnown RBP4.05□□□□□ -1.76
SNHG1-219ENST00000542112 NCDNQ9UBB6 729 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 NAGKQ9UJ70 344 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 GNG8Q9UK08 70 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 FBXL4Q9UKA2 621 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 FZD10Q9ULW2 581 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 ST3GAL5Q9UNP4 418 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 BTRCQ9Y297 605 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 MRPS2Q9Y399 296 aaKnown RBP4.05□□□□□ -1.76
SNHG1-219ENST00000542112 ADAM18Q9Y3Q7 739 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 OR51B4Q9Y5P0 310 aa4.05□□□□□ -1.76
SNHG1-219ENST00000542112 LRRC37AA6NMS7 1700 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 LTBP1Q14766 1721 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 A0A0D9SG52 128 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CCDC195A0A1B0GUA6 201 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 A0A1B0GV72 72 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ABHD14A-ACY1A0A1B0GW23 586 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 OR14I1A6ND48 311 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ANXA2P2A6NMY6 339 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ZNF587BE7ETH6 402 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 F5H0A9 414 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ACOT7O00154 380 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 HRKO00198 91 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 UPK1AO00322 258 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CDIPTO14735 213 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 EIF3DO15371 548 aaKnown RBP eCLIP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ARPC5O15511 151 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 COCHO43405 550 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 KIAA0513O60268 411 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ATP6AP2O75787 350 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SGPL1O95470 568 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CFDP00746 253 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 C1QAP02745 245 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 OR5AC1P0C628 307 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 PIPP12273 146 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 RPA2P15927 270 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 MGMTP16455 207 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 PSMA1P25786 263 aaKnown RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 PTPN3P26045 913 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 AGTR1P30556 359 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SLC6A4P31645 630 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CD200P41217 278 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ELK3P41970 407 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SLC11A1P49279 550 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CDC34P49427 236 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CEBPDP49716 269 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 TNFSF10P50591 281 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CTSCP53634 463 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CLDN8P56748 225 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SCAND1P57086 179 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 OR10A3P58181 314 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 TAS2R39P59534 338 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SNRPFP62306 86 aaKnown RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SELENOTP62341 195 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 CSNK1G2P78368 415 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SIM1P81133 766 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 PRR5P85299 388 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 HSF1Q00613 529 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 MC1RQ01726 317 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 MEF2AQ02078 507 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 NHLH1Q02575 133 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 C2orf80Q0P641 193 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 TMEM115Q12893 351 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SLC10A2Q12908 348 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SCGB2A2Q13296 93 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 IRF3Q14653 427 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 HLXQ14774 488 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 MAD2L1BPQ15013 274 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 RPS6KA2Q15349 733 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 RSU1Q15404 277 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 TMEM241Q24JQ0 296 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ISXQ2M1V0 245 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 PYCR3Q53H96 274 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ACTBL2Q562R1 376 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ZNF628Q5EBL2 1059 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ZRANB3Q5FWF4 1079 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 TMEM240Q5SV17 173 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SPATA46Q5T0L3 261 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 AKR1C8PQ5T2L2 129 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SLC22A10Q63ZE4 541 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 NSUN5P2Q63ZY6 315 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 FBXO42Q6P3S6 717 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 FBXO46Q6PJ61 603 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 LCLAT1Q6UWP7 414 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 TMIGD1Q6UXZ0 262 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 RPTNQ6XPR3 784 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SLC39A5Q6ZMH5 540 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ESPNLQ6ZVH7 1005 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 SSX7Q7RTT5 188 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 PLPPR4Q7Z2D5 763 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 TIPARPQ7Z3E1 657 aaKnown RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 GRINAQ7Z429 371 aa4.04□□□□□ -1.76
SNHG1-219ENST00000542112 ABHD12BQ7Z5M8 362 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-219ENST00000542112 WDR53Q7Z5U6 358 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms