RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.68■■□□□ 1.383e-6■■■■■ 27.6
CHFR-218ENST00000540963 A0A1W2PPM1 405 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 ZNF724A8MTY0 619 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 CRCPO75575 148 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 PRKCAP17252 672 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 SLC7A1P30825 629 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 PDE7AQ13946 482 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 KRTAP24-1Q3LI83 254 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 KLHL26Q53HC5 615 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 SLC25A53Q5H9E4 307 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 TMEM108Q6UXF1 575 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 FCRL1Q96LA6 429 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 DHRS9Q9BPW9 319 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 C1orf109Q9NX04 203 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 NPAP1Q9NZP6 1156 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 PRSS50Q9UI38 385 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 ANK2Q01484 3957 aa23.68■■□□□ 1.38
CHFR-218ENST00000540963 OR5H1A6NKK0 313 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 CYTIPO60759 359 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 RASGEF1BQ0VAM2 473 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 MLC1Q15049 377 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 RAB35Q15286 201 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 ZNF385BQ569K4 471 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 CCNJQ5T5M9 372 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 CYB5R2Q6BCY4 276 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 ANKRD26P1Q6NSI1 321 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 CBLN3Q6UW01 205 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 FRMD7Q6ZUT3 714 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 GPR119Q8TDV5 335 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 PROX1Q92786 737 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 ARL8AQ96BM9 186 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 C16orf58Q96GQ5 468 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 SHARPINQ9H0F6 387 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 PIGUQ9H490 435 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 DCDC2Q9UHG0 476 aa23.67■■□□□ 1.38
CHFR-218ENST00000540963 H7C417 338 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 ETV2O00321 342 aaPredicted RBP23.66■■□□□ 1.38
CHFR-218ENST00000540963 SHBGP04278 402 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 CSF3P09919 207 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 UROSP10746 265 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 ATP6V1C1P21283 382 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 IGHV1-2P23083 117 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 PTAFRP25105 342 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 MTERF3Q96E29 417 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 SH3BP4Q9P0V3 963 aa23.66■■□□□ 1.38
CHFR-218ENST00000540963 G3V2L1 256 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 SLC28A1O00337 649 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 DDX5P17844 614 aaKnown RBP23.65■■□□□ 1.38
CHFR-218ENST00000540963 LRIG3Q6UXM1 1119 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 ZYG11AQ6WRX3 759 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 FBXL14Q8N1E6 418 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 MUC15Q8N387 334 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 FAM168AQ92567 244 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 JADE3Q92613 823 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 TBK1Q9UHD2 729 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 CARD8Q9Y2G2 431 aa23.65■■□□□ 1.38
CHFR-218ENST00000540963 E7EQL1 145 aa23.64■■□□□ 1.37
CHFR-218ENST00000540963 DHRS4L1P0CG22 281 aa23.64■■□□□ 1.37
CHFR-218ENST00000540963 MYL2P10916 166 aa23.64■■□□□ 1.37
CHFR-218ENST00000540963 SDC1P18827 310 aa23.64■■□□□ 1.37
CHFR-218ENST00000540963 KLHL17Q6TDP4 642 aa23.64■■□□□ 1.37
CHFR-218ENST00000540963 RNF165Q6ZSG1 346 aa23.64■■□□□ 1.37
CHFR-218ENST00000540963 GALNT5Q7Z7M9 940 aa23.64■■□□□ 1.37
CHFR-218ENST00000540963 PIAS4Q8N2W9 510 aaPredicted RBP23.64■■□□□ 1.37
CHFR-218ENST00000540963 ZNF433Q8N7K0 673 aaPredicted RBP23.64■■□□□ 1.37
CHFR-218ENST00000540963 ZNF75CPQ92670 426 aaPredicted RBP23.64■■□□□ 1.37
CHFR-218ENST00000540963 FAM120BQ96EK7 910 aaKnown RBP23.64■■□□□ 1.37
CHFR-218ENST00000540963 C12orf65Q9H3J6 166 aaKnown RBP23.64■■□□□ 1.37
CHFR-218ENST00000540963 TNFRSF12AQ9NP84 129 aa23.64■■□□□ 1.37
CHFR-218ENST00000540963 ZCCHC3Q9NUD5 404 aaKnown RBP23.64■■□□□ 1.37
CHFR-218ENST00000540963 PSMC3IPQ9P2W1 217 aaPredicted RBP23.64■■□□□ 1.37
CHFR-218ENST00000540963 IGHV3-15A0A0B4J1V0 119 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 GTPBP1O00178 669 aaKnown RBP23.63■■□□□ 1.37
CHFR-218ENST00000540963 SMAD9O15198 467 aaKnown RBP23.63■■□□□ 1.37
CHFR-218ENST00000540963 HMGN2P05204 90 aaKnown RBP23.63■■□□□ 1.37
CHFR-218ENST00000540963 DNAJB13P59910 316 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 TOMM34Q15785 309 aaPredicted RBP23.63■■□□□ 1.37
CHFR-218ENST00000540963 MALRD1Q5VYJ5 2156 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 ZNF544Q6NX49 715 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 CDC73Q6P1J9 531 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 C3orf33Q6P1S2 294 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 SLC22A25Q6T423 547 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 HOMEZQ8IX15 550 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 ZNF100Q8IYN0 542 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 DEPDC4Q8N2C3 294 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 ATP6V1C2Q8NEY4 427 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 OR5W2Q8NH69 310 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 OR2W6PQ8NHA6 318 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 CDS1Q92903 461 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 C19orf24Q9BVV8 132 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 POU2F3Q9UKI9 436 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 TMED5Q9Y3A6 229 aa23.63■■□□□ 1.37
CHFR-218ENST00000540963 HEATR1Q9H583 2144 aaKnown RBP23.63■■□□□ 1.37
CHFR-218ENST00000540963 A0A1W2PNR3 127 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 OIP5O43482 229 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 AKAP10O43572 662 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 EIF4E2O60573 245 aaKnown RBP23.62■■□□□ 1.37
CHFR-218ENST00000540963 NEFHP12036 1026 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 BMP4P12644 408 aa23.62■■□□□ 1.37
CHFR-218ENST00000540963 PTNP21246 168 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms