RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 GIMAP5Q96F15 307 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 SLC35A4Q96G79 324 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 HRASLS5Q96KN8 279 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 HS6ST2Q96MM7 605 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 MUS81Q96NY9 551 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 FEVQ99581 238 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 PITX2Q99697 317 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ARHGDIGQ99819 225 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ZNF559Q9BR84 538 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 DGCR6LQ9BY27 220 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 UCK2Q9BZX2 261 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 AMBRA1Q9C0C7 1298 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ZNF350Q9GZX5 532 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 SLC38A1Q9H2H9 487 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 SMURF2Q9HAU4 748 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ZNF304Q9HCX3 659 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 EQTNQ9NQ60 294 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 MAT2BQ9NZL9 334 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 COPS7AQ9UBW8 275 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 TMEFF2Q9UIK5 374 aaPredicted RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 RARRES3Q9UL19 164 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 NDRG4Q9ULP0 352 aaKnown RBP7.69□□□□□ -1.18
CHD4-208ENST00000540960 TMEM5Q9Y2B1 443 aa7.69□□□□□ -1.18
CHD4-208ENST00000540960 ZNF860A6NHJ4 632 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 OR10H3O60404 316 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 B4GALT2O60909 372 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 PRKRAO75569 313 aaKnown RBP7.68□□□□□ -1.18
CHD4-208ENST00000540960 OPN1SWP03999 348 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 CHRM4P08173 479 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 OSMP13725 252 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 NID1P14543 1247 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 AGAP20933 346 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 AGXTP21549 392 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 ALAS2P22557 587 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 GABRA3P34903 492 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 OR1E2P47887 323 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 LIMS1P48059 325 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 DAPP51397 102 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 CRYBA2P53672 197 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 GFERP55789 205 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 OLR1P78380 273 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 FUT7Q11130 342 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 APOFQ13790 326 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 ELAVL1Q15717 326 aaKnown RBP7.68□□□□□ -1.18
CHD4-208ENST00000540960 DECR1Q16698 335 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 EXOC3L2Q2M3D2 409 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 ZIK1Q3SY52 487 aaPredicted RBP7.68□□□□□ -1.18
CHD4-208ENST00000540960 HLA-DQA1Q5Y7H0 255 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 FAAH2Q6GMR7 532 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 RPL13AP3Q6NVV1 102 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 GFRALQ6UXV0 394 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 DEF8Q6ZN54 512 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 GPR141Q7Z602 305 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 KRTAP1-3Q8IUG1 177 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 GRAMD2AQ8IUY3 354 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 CYP4Z2PQ8N1L4 340 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 SLC16A11Q8NCK7 471 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 OR5D16Q8NGK9 328 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 PIGXQ8TBF5 258 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 GNPDA2Q8TDQ7 276 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 FBLIM1Q8WUP2 373 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 FCGR1BQ92637 280 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 C16orf58Q96GQ5 468 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 PEX11GQ96HA9 241 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 MS4A3Q96HJ5 214 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 FBXL20Q96IG2 436 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 MBOAT4Q96T53 435 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 CSF3RQ99062 836 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 SDF2Q99470 211 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 BCL7BQ9BQE9 202 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 YIPF2Q9BWQ6 316 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 TRIM2Q9C040 744 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 NDEL1Q9GZM8 345 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 TGIF2Q9GZN2 237 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 TMEM27Q9HBJ8 222 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 ADAP2Q9NPF8 381 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 PLCXD1Q9NUJ7 323 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 HCN3Q9P1Z3 774 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 C19orf25Q9UFG5 118 aaPredicted RBP7.68□□□□□ -1.18
CHD4-208ENST00000540960 TESQ9UGI8 421 aaKnown RBP7.68□□□□□ -1.18
CHD4-208ENST00000540960 NDOR1Q9UHB4 597 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 NXT1Q9UKK6 140 aaKnown RBP7.68□□□□□ -1.18
CHD4-208ENST00000540960 ZNF443Q9Y2A4 671 aaPredicted RBP7.68□□□□□ -1.18
CHD4-208ENST00000540960 SLC35A3Q9Y2D2 325 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 OR10H1Q9Y4A9 318 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 CLCA3PQ9Y6N3 262 aa7.68□□□□□ -1.18
CHD4-208ENST00000540960 SH3PXD2BA1X283 911 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 TRAPPC13A5PLN9 417 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 TMEM229AB2RXF0 380 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 KIF1CO43896 1103 aaKnown RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 KIAA0513O60268 411 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 LDB3O75112 727 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 NME6O75414 186 aaPredicted RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 CYP7B1O75881 506 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 SEC24DO94855 1032 aaPredicted RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 ANGPTL1O95841 491 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 ONECUT2O95948 504 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 FGF5P12034 268 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 HPGDP15428 266 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 JUNBP17275 347 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms