RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 OR2G6Q5TZ20 316 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 SLC22A10Q63ZE4 541 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 LANCL3Q6ZV70 420 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 FOXRED2Q8IWF2 684 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 LGI4Q8N135 537 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 SAMD12Q8N8I0 201 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ZFP41Q8N8Y5 198 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 OR8J2Q8NGG1 315 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 OR5M1Q8NGP8 315 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 OR51Q1Q8NH59 317 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 OR52J3Q8NH60 311 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 BBS10Q8TAM1 723 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ZBTB45Q96K62 511 aaPredicted RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 ELF4Q99607 663 aaPredicted RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 OSMRQ99650 979 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 NRIP2Q9BQI9 281 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 FAM83CQ9BQN1 747 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 ACBD6Q9BR61 282 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 NRSN2Q9GZP1 204 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 TKTL2Q9H0I9 626 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 GAL3ST2Q9H3Q3 398 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 TMEM248Q9NWD8 314 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 RCC2Q9P258 522 aaKnown RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 NPFFR2Q9Y5X5 522 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 KIAA0100Q14667 2235 aaKnown RBP8.82□□□□□ -1
CLIP1-214ENST00000540539 FRMPD3Q5JV73 1810 aa8.82□□□□□ -1
CLIP1-214ENST00000540539 TRAPPC13A5PLN9 417 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 C2orf72A6NCS6 295 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 ZAR1LA6NP61 321 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 WNT9AO14904 365 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 NARSO43776 548 aaKnown RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 FOSL2P15408 326 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 CD1DP15813 335 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 DAOAP59103 153 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 CD81P60033 236 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 TPBGQ13641 420 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 KLF9Q13886 244 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 TMEM132DQ14C87 1099 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 SF1Q15637 639 aaKnown RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 C9orf64Q5T6V5 341 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 TMEM244Q5VVB8 128 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 RNLSQ5VYX0 342 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 LHX8Q68G74 356 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 CDC73Q6P1J9 531 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 KDELC2Q7Z4H8 507 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 MARCH9Q86YJ5 346 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 OR10A7Q8NGE5 316 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 THAP4Q8WY91 577 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 MVB12AQ96EY5 273 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 TPD52L3Q96J77 140 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 C5orf34Q96MH7 638 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 OR51V1Q9H2C8 321 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 PARD6AQ9NPB6 346 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 MEPEQ9NQ76 525 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 FTSJ1Q9UET6 329 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 IL17BQ9UHF5 180 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 STARD10Q9Y365 291 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 TRDV1A0A1B0GX56 115 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 CHST10O43529 356 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 HCRTR2O43614 444 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 HBP1O60381 514 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 CREBL2O60519 120 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 C1QCP02747 245 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 SLC35G4P0C7Q5 338 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 THEGLP0DJG4 465 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 NDUFS1P28331 727 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 KDELR2P33947 212 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 STAT5AP42229 794 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 GLP1RP43220 463 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 FAM189A2Q15884 450 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 OCLNQ16625 522 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 C2orf68Q2NKX9 166 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 RFTN2Q52LD8 501 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 TIGD5Q53EQ6 642 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 ZNF626Q68DY1 528 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 CBLL1Q75N03 491 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 ANKRD33Q7Z3H0 272 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 C6orf120Q7Z4R8 191 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 WDR53Q7Z5U6 358 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 BCDIN3DQ7Z5W3 292 aaKnown RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 TSEN54Q7Z6J9 526 aaKnown RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 THNSL2Q86YJ6 484 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 C19orf47Q8N9M1 422 aaKnown RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 KLHDC9Q8NEP7 349 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 OR52N2Q8NGI0 321 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 GTPBP3Q969Y2 492 aaKnown RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 MALSU1Q96EH3 234 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 NECAB3Q96P71 396 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 MGME1Q9BQP7 344 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 ARHGAP9Q9BRR9 750 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 NT5C1AQ9BXI3 368 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 NOX3Q9HBY0 568 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 CD84Q9UIB8 345 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 NUP214P35658 2090 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 TRIP12Q14669 1992 aaPredicted RBP8.81□□□□□ -1
CLIP1-214ENST00000540539 SCN10AQ9Y5Y9 1956 aa8.81□□□□□ -1
CLIP1-214ENST00000540539 FNDC1Q4ZHG4 1894 aaPredicted RBP8.8□□□□□ -1
CLIP1-214ENST00000540539 C2orf92A0A1B0GVN3 265 aa8.8□□□□□ -1
CLIP1-214ENST00000540539 OR14I1A6ND48 311 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms