RNA–Protein interactions for RNA: ENST00000540438.5

USP28-208, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 3,015 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-208ENST00000540438 C19orf53Q9UNZ5 99 aaPredicted RBP15.64■□□□□ 0.09
USP28-208ENST00000540438 ZDBF2Q9HCK1 2354 aa15.64■□□□□ 0.09
USP28-208ENST00000540438 DENND4AQ7Z401 1863 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 A0A1B0GWA3 101 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 C2orf74A8MZ97 194 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 SMLR1H3BR10 107 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 TNFP01375 233 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 PYCR1P32322 319 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 PSMB10P40306 273 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 OR1D4P47884 311 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 VASNQ6EMK4 673 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 HEPHL1Q6MZM0 1159 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 OAFQ86UD1 273 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 RANBP3LQ86VV4 465 aaPredicted RBP15.63■□□□□ 0.09
USP28-208ENST00000540438 ZNF619Q8N2I2 560 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 C10orf53Q8N6V4 93 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 OR52E2Q8NGJ4 325 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 SRRQ9GZT4 340 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 PIGUQ9H490 435 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 OR10H1Q9Y4A9 318 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 TRAPPC13A5PLN9 417 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 CDHR4A6H8M9 788 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 GALR3O60755 368 aaPredicted RBP15.63■□□□□ 0.09
USP28-208ENST00000540438 FCER2P06734 321 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 TCEA1P23193 301 aaKnown RBP15.63■□□□□ 0.09
USP28-208ENST00000540438 FPR3P25089 353 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 POU6F2P78424 691 aaPredicted RBP15.63■□□□□ 0.09
USP28-208ENST00000540438 PSG6Q00889 435 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 FZD5Q13467 585 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 NDUFA9Q16795 377 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 AMZ1Q400G9 498 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 PRPF38BQ5VTL8 546 aaKnown RBP15.63■□□□□ 0.09
USP28-208ENST00000540438 USP53Q70EK8 1073 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 ZDHHC1Q8WTX9 485 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 SCARF2Q96GP6 870 aaPredicted RBP15.63■□□□□ 0.09
USP28-208ENST00000540438 B3GAT2Q9NPZ5 323 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 CA14Q9ULX7 337 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 CDH10Q9Y6N8 788 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 FRYQ5TBA9 3013 aa15.63■□□□□ 0.09
USP28-208ENST00000540438 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.62■□□□□ 0.09
USP28-208ENST00000540438 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.62■□□□□ 0.09
USP28-208ENST00000540438 GSTT2P0CG29 244 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 GSTT2BP0CG30 244 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 PSKH1P11801 424 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 FOXK2Q01167 660 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 FZD2Q14332 565 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 DECR1Q16698 335 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 HYAL4Q2M3T9 481 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 C3orf38Q5JPI3 329 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 FAAH2Q6GMR7 532 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 RNF44Q7L0R7 432 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 CLDN22Q8N7P3 220 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 OR52L1Q8NGH7 329 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 H7C1C5 153 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 POU2F2P09086 479 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 SMIM10L1P0DMW3 83 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 NID1P14543 1247 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 LCN6P62502 163 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 ALG10BQ5I7T1 473 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 C6orf183Q5T699 404 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 TMEM91Q6ZNR0 172 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 IZUMO1Q8IYV9 350 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 FAM98AQ8NCA5 519 aaKnown RBP15.62■□□□□ 0.09
USP28-208ENST00000540438 RCBTB1Q8NDN9 531 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 PPP1R14BQ96C90 147 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 SMIM10Q96HG1 83 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 C4orf36Q96KX1 117 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 HS6ST2Q96MM7 605 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 ERMAPQ96PL5 475 aaPredicted RBP15.62■□□□□ 0.09
USP28-208ENST00000540438 CALML5Q9NZT1 146 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 NDUFS1P28331 727 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 RPL4P36578 427 aaKnown RBP15.62■□□□□ 0.09
USP28-208ENST00000540438 KIAA1024LP59773 190 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 MGAT2Q10469 447 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 DSG2Q14126 1118 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 ZNF517Q6ZMY9 492 aaPredicted RBP15.62■□□□□ 0.09
USP28-208ENST00000540438 KLHL36Q8N4N3 616 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 OR6K6Q8NGW6 343 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 OR5J2Q8NH18 312 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 GCDHQ92947 438 aaPredicted RBP15.62■□□□□ 0.09
USP28-208ENST00000540438 RIT1Q92963 219 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 ZNF350Q9GZX5 532 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 ANKHQ9HCJ1 492 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 NLKQ9UBE8 527 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 DHCR7Q9UBM7 475 aaKnown RBP15.62■□□□□ 0.09
USP28-208ENST00000540438 SDK2Q58EX2 2172 aa15.62■□□□□ 0.09
USP28-208ENST00000540438 KDM4EB2RXH2 506 aaPredicted RBP15.61■□□□□ 0.09
USP28-208ENST00000540438 SYT5O00445 386 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 IMPDH2P12268 514 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 TEKQ02763 1124 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 FHL5Q5TD97 284 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 DDI2Q5TDH0 399 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 ZNF322Q6U7Q0 402 aaPredicted RBP15.61■□□□□ 0.09
USP28-208ENST00000540438 CD300LDQ6UXZ3 194 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 OOSP2Q86WS3 158 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 LMX1AQ8TE12 382 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 MOAP1Q96BY2 351 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 TP63Q9H3D4 680 aaPredicted RBP15.61■□□□□ 0.09
USP28-208ENST00000540438 SP140LQ9H930 580 aa15.61■□□□□ 0.09
USP28-208ENST00000540438 URADA6NGE7 173 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms