RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 LIM2P55344 173 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 EIF4EBP2Q13542 120 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-203ENST00000540357 ODF4Q2M2E3 257 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 CCSMST1Q4G0I0 132 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 POMZP3Q6PJE2 187 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 ACOT4Q8N9L9 421 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 OR4E2Q8NGC2 313 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 METTL8Q9H825 291 aaKnown RBP12.17□□□□□ -0.46
DNMT1-203ENST00000540357 BIN3Q9NQY0 253 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 ETHE1O95571 254 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 EGFP01133 1207 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 F11P03951 625 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 SLC7A9P82251 487 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 IRF4Q15306 451 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 ALG10BQ5I7T1 473 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 SLC51BQ86UW2 128 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 GRAMD2AQ8IUY3 354 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 TMEM185AQ8NFB2 350 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 SNIP1Q8TAD8 396 aaKnown RBP12.17□□□□□ -0.46
DNMT1-203ENST00000540357 LGALS14Q8TCE9 139 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 ARL11Q969Q4 196 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 PMEPA1Q969W9 287 aa12.17□□□□□ -0.46
DNMT1-203ENST00000540357 PLEKHB1Q9UF11 243 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-203ENST00000540357 KIAA0355O15063 1070 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 MTRF1O75570 445 aaKnown RBP12.16□□□□□ -0.46
DNMT1-203ENST00000540357 ATP1B1P05026 303 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 OPRD1P41143 372 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 OR3A2P47893 321 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 ITPRIPL2Q3MIP1 535 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 KIAA1324Q6UXG2 1013 aaKnown RBP12.16□□□□□ -0.46
DNMT1-203ENST00000540357 GLB1L2Q8IW92 636 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 CASTOR1Q8WTX7 329 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 ST8SIA4Q92187 359 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 SFXN2Q96NB2 322 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 AMDHD1Q96NU7 426 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 G6PC3Q9BUM1 346 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 RSPH9Q9H1X1 276 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-203ENST00000540357 SLC5A10A0PJK1 596 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 POM121CA8CG34 1229 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 NPIPB8E9PQR5 432 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 GALP22466 123 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 MRPL58Q14197 206 aaKnown RBP12.16□□□□□ -0.46
DNMT1-203ENST00000540357 CCDC71Q8IV32 467 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-203ENST00000540357 SERPINA12Q8IW75 414 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 SLC25A18Q9H1K4 315 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 TRAV18A0A075B6X5 111 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 F8W036 122 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 H3BNC9 293 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 SDC3O75056 442 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 HRGP04196 525 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 HBQ1P09105 142 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 CAPZA1P52907 286 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 BLOC1S1P78537 153 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 DYRK1AQ13627 763 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 SMUG1Q53HV7 270 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 SLC25A24Q6NUK1 477 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 KCTD20Q7Z5Y7 419 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 FOXJ1Q92949 421 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 TRIM43Q96BQ3 446 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-203ENST00000540357 NARFLQ9H6Q4 476 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 ELL3Q9HB65 397 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-203ENST00000540357 SOHLH2Q9NX45 425 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 DHDHQ9UQ10 334 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 GNRH1P01148 92 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 HIST1H1TP22492 207 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-203ENST00000540357 CERS1P27544 350 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 FCRLAQ7L513 359 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 CNTNAP3BQ96NU0 1288 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 GLIPR2Q9H4G4 154 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 ANKRD31Q8N7Z5 1873 aa12.16□□□□□ -0.46
DNMT1-203ENST00000540357 EIF4EP06730 217 aaKnown RBP12.15□□□□□ -0.46
DNMT1-203ENST00000540357 CXCR1P25024 350 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 PXNP49023 591 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-203ENST00000540357 ID2Q02363 134 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 CNKSR3Q6P9H4 555 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 SVBPQ8N300 66 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 CDRT4Q8N9R6 151 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 CDS1Q92903 461 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 SYT4Q9H2B2 425 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 COL11A2P13942 1736 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-203ENST00000540357 A0A087WUU8 490 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 ADAM12O43184 909 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 AMY2AP04746 511 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 ITGA3P26006 1051 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 SIRPAP78324 504 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 REEP5Q00765 189 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 ELAVL3Q14576 367 aaKnown RBP12.15□□□□□ -0.46
DNMT1-203ENST00000540357 OR1Q1Q15612 314 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 PLEKHN1Q494U1 663 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-203ENST00000540357 C6orf132Q5T0Z8 1188 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 GDF7Q7Z4P5 450 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 SLC35F3Q8IY50 421 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 C10orf111Q8N326 155 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 LSMEM1Q8N8F7 131 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 NLGN4YQ8NFZ3 816 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-203ENST00000540357 CHST8Q9H2A9 424 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 SYNPO2LQ9H987 977 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 CUEDC1Q9NWM3 386 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-203ENST00000540357 ACTR10Q9NZ32 417 aa12.15□□□□□ -0.46
DNMT1-203ENST00000540357 CBLCQ9ULV8 474 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms