RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ME2P23368 584 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 DNASE1P24855 282 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 LOXP28300 417 aaPredicted RBP14.98□□□□□ -0.01
DDB1-215ENST00000539712 EPHA3P29320 983 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 CLNS1AP54105 237 aaKnown RBP14.98□□□□□ -0.01
DDB1-215ENST00000539712 PLAURQ03405 335 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 TYW3Q6IPR3 259 aaKnown RBP14.98□□□□□ -0.01
DDB1-215ENST00000539712 TNFAIP8L2Q6P589 184 aaPredicted RBP14.98□□□□□ -0.01
DDB1-215ENST00000539712 ZNF550Q7Z398 422 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 MAVSQ7Z434 540 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 ZNF614Q8N883 585 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 FAM71CQ8NEG0 241 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 OR6K3Q8NGY3 331 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 MGARPQ8TDB4 240 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 ROBO4Q8WZ75 1007 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 MRGPRX4Q96LA9 322 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 INPP5KQ9BT40 448 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 TMUB1Q9BVT8 246 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 PRRG4Q9BZD6 226 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 LAT2Q9GZY6 243 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 MARCOQ9UEW3 520 aaPredicted RBP14.98□□□□□ -0.01
DDB1-215ENST00000539712 BTNL2Q9UIR0 455 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 MCTS1Q9ULC4 181 aaKnown RBP14.98□□□□□ -0.01
DDB1-215ENST00000539712 PCDHGB4Q9UN71 923 aa14.98□□□□□ -0.01
DDB1-215ENST00000539712 GOLGA8QA0A0J9YX86 632 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 GOLGA8OA6NCC3 632 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 GOLGA8NF8WBI6 632 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 KIAA0513O60268 411 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 SYNGR4O95473 234 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 NUDT14O95848 222 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 THBDP07204 575 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 CRYGSP22914 178 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 S100A3P33764 101 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 PGM1P36871 562 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 CDKN2CP42773 168 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 QPRTQ15274 297 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 ZNF239Q16600 458 aaKnown RBP14.97□□□□□ -0.01
DDB1-215ENST00000539712 DPY19L1Q2PZI1 675 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 TMEM176BQ3YBM2 270 aaPredicted RBP14.97□□□□□ -0.01
DDB1-215ENST00000539712 PPP4R4Q6NUP7 873 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 FRRS1Q6ZNA5 592 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 SPATA19Q7Z5L4 167 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 RFWD2Q8NHY2 731 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 RNF128Q8TEB7 428 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 ABHD3Q8WU67 409 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 XAGE5Q8WWM1 108 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 ROPN1LQ96C74 230 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 MAELQ96JY0 434 aaKnown RBP14.97□□□□□ -0.01
DDB1-215ENST00000539712 ALPK1Q96QP1 1244 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 SLC35A5Q9BS91 424 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 GLRX2Q9NS18 164 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 ING1Q9UK53 422 aaPredicted RBP14.97□□□□□ -0.01
DDB1-215ENST00000539712 EMC9Q9Y3B6 208 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 FREM1Q5H8C1 2179 aa14.97□□□□□ -0.01
DDB1-215ENST00000539712 HMGN4O00479 90 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 CASKO14936 926 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 RAF1P04049 648 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 PGRP06401 933 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 CD53P19397 219 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 AGTR1P30556 359 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 FBXW10Q5XX13 1052 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 ANKRD34AQ69YU3 496 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 STAC2Q6ZMT1 411 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 C16orf62Q7Z3J2 963 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 VPS37AQ8NEZ2 397 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 TOR1AIP2Q8NFQ8 470 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 THUMPD3Q9BV44 507 aaKnown RBP14.96□□□□□ -0.01
DDB1-215ENST00000539712 QRSL1Q9H0R6 528 aaKnown RBP14.96□□□□□ -0.01
DDB1-215ENST00000539712 SLC6A13Q9NSD5 602 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 EXD2Q9NVH0 621 aa14.96□□□□□ -0.01
DDB1-215ENST00000539712 CCDC154A6NI56 674 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 ADAM11O75078 769 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 H6PDO95479 791 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 AGR2O95994 175 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 PLGP00747 810 aaPredicted RBP14.95□□□□□ -0.02
DDB1-215ENST00000539712 CSTAP01040 98 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 KITP10721 976 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 KLK2P20151 261 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 ENPP1P22413 925 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 KCNJ5P48544 419 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 CTBP2P56545 445 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 SESN3P58005 492 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 CHRNEQ04844 493 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 CBFBQ13951 182 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 EXOC3L2Q2M3D2 409 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 TIGD2Q4W5G0 525 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 SLC9B1Q4ZJI4 515 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 PDSS1Q5T2R2 415 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 NUFIP2Q7Z417 695 aaKnown RBP14.95□□□□□ -0.02
DDB1-215ENST00000539712 HMGN2P46Q86SG4 172 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 RNF130Q86XS8 419 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 TGIF2LYQ8IUE0 185 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 ATP6V1C2Q8NEY4 427 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 RAB3IL1Q8TBN0 382 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 ZFP90Q8TF47 636 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 CPNE4Q96A23 557 aaPredicted RBP14.95□□□□□ -0.02
DDB1-215ENST00000539712 HS3ST6Q96QI5 342 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 MED18Q9BUE0 208 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 KLHL4Q9C0H6 718 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 MANSC1Q9H8J5 431 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms