RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ZNF791Q3KP31 576 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 PKDCCQ504Y2 493 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MANEAQ5SRI9 462 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 KIF18BQ86Y91 864 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 TMEM163Q8TC26 289 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 BORCS7Q96B45 105 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 PRR11Q96HE9 360 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 ATOH8Q96SQ7 321 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 SLC30A3Q99726 388 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 PAPOLGQ9BWT3 736 aaKnown RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 PLEK2Q9NYT0 353 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 INTS6Q9UL03 887 aaKnown RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF736B4DX44 427 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 B4DXG7 233 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 H3BML4 177 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 IGHG1P01857 330 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 EFNA3P52797 238 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 EEF1A1P68104 462 aaKnown RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 CNIH2Q6PI25 160 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 SLC35F3Q8IY50 421 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GTPBP8Q8N3Z3 284 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 LILRB2Q8N423 598 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 CLSTN3Q9BQT9 956 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 TMEM246Q9BRR3 403 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 CNIH4Q9P003 139 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 LRIT1Q9P2V4 623 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 IL20RAQ9UHF4 553 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 RPH3AQ9Y2J0 694 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 AK6Q9Y3D8 172 aaKnown RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 CACNG2Q9Y698 323 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 H0YIV9 168 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 P2RX6O15547 441 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 HMGN2P05204 90 aaKnown RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 HOXD9P28356 352 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GMPRP36959 345 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 TNFRSF17Q02223 184 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 OPN5Q6U736 354 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 TECPR1Q7Z6L1 1165 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 PRR22Q8IZ63 422 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 DCUN1D4Q92564 292 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 ST6GALNAC5Q9BVH7 336 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 HDAC8Q9BY41 377 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 AGPAT4Q9NRZ5 378 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 OR52A4PA6NMU1 304 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 RFPL3O75679 317 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GLSO94925 669 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 POU3F2P20265 443 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GPR50Q13585 617 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GPR18Q14330 331 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 TAZQ16635 292 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 FCRLBQ6BAA4 426 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 TPRA1Q86W33 373 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 LRRC28Q86X40 367 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 PPP1R3BQ86XI6 285 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 OR6Q1Q8NGQ2 317 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MALSU1Q96EH3 234 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 ZBED3Q96IU2 234 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MS4A4AQ96JQ5 239 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 SYT11Q9BT88 431 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 VAPAQ9P0L0 249 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 NHSL1Q5SYE7 1610 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 A0A0A6YYC8 382 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 I3L1I5 382 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GALR3O60755 368 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MPIG6BO95866 241 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 OR8U9P0C7N5 309 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 ACP2P11117 423 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 CD46P15529 392 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 RAB38P57729 211 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GK2Q14410 553 aaPredicted RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 TP53I3Q53FA7 332 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 FAM180BQ6P0A1 224 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF480Q8WV37 535 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 ARL11Q969Q4 196 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GIMAP5Q96F15 307 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 SEMA6CQ9H3T2 930 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 C1orf198Q9H425 327 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 SLC6A20Q9NP91 592 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 THSD1Q9NS62 852 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MED17Q9NVC6 651 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 POLHQ9Y253 713 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 WIF1Q9Y5W5 379 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 B3GALT1Q9Y5Z6 326 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 XIRP1Q702N8 1843 aaKnown RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 A0A0A6YYH2 397 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 A6NJ64 397 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MEN1O00255 615 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 LYRM1O43325 122 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 TOXO94900 526 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 F3P13726 295 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 GJA5P36382 358 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 RPL23AP62750 156 aaKnown RBP6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MS4A2Q01362 244 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 C6orf183Q5T699 404 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 DCAF12Q5T6F0 453 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 PODNL1Q6PEZ8 512 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 PLPP6Q8IY26 295 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 MMP21Q8N119 569 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 METTL4Q8N3J2 472 aa6.08□□□□□ -1.44
LSAMP-207ENST00000539563 C19orf47Q8N9M1 422 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms