RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 CDK3Q00526 305 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 GALEQ14376 348 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 GSG1Q2KHT4 349 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 OR51A7Q8NH64 312 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 SFXN5Q8TD22 340 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 ZNF707Q96C28 371 aaPredicted RBP18.83■□□□□ 0.6
TMEM260-203ENST00000539559 SORCS2Q96PQ0 1159 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 IFT27Q9BW83 186 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 BRD7Q9NPI1 651 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 MED17Q9NVC6 651 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 SIDT1Q9NXL6 827 aaKnown RBP18.83■□□□□ 0.6
TMEM260-203ENST00000539559 APOBEC3BQ9UH17 382 aaKnown RBP18.83■□□□□ 0.6
TMEM260-203ENST00000539559 PPIEQ9UNP9 301 aaKnown RBP18.83■□□□□ 0.6
TMEM260-203ENST00000539559 SATB2Q9UPW6 733 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 NUBP2Q9Y5Y2 271 aa18.83■□□□□ 0.6
TMEM260-203ENST00000539559 RPS10-NUDT3A0A1W2PQS6 291 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 OR7A10O76100 309 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 F8A1P23610 371 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 TRA2BP62995 288 aaKnown RBP18.82■□□□□ 0.6
TMEM260-203ENST00000539559 MAPK14Q16539 360 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 OR51L1Q8NGJ5 315 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 OR8D1Q8WZ84 308 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 GHSRQ92847 366 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 ZNF764Q96H86 408 aaPredicted RBP18.82■□□□□ 0.6
TMEM260-203ENST00000539559 PRSS27Q9BQR3 290 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 NDC1Q9BTX1 674 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 SPHK1Q9NYA1 384 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 OTOL1A6NHN0 477 aaPredicted RBP18.82■□□□□ 0.6
TMEM260-203ENST00000539559 H2AFB2P0C5Z0 115 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 HTR2AP28223 471 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 MPIP34949 423 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 ID2Q02363 134 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 TMEM44Q2T9K0 475 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 CD276Q5ZPR3 534 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 GET4Q7L5D6 327 aaPredicted RBP18.82■□□□□ 0.6
TMEM260-203ENST00000539559 AHCYL2Q96HN2 611 aaKnown RBP18.82■□□□□ 0.6
TMEM260-203ENST00000539559 RBP7Q96R05 134 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 TEAD3Q99594 435 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 SPRTNQ9H040 489 aaPredicted RBP18.82■□□□□ 0.6
TMEM260-203ENST00000539559 DLL4Q9NR61 685 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 FBXO34Q9NWN3 711 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 WSB2Q9NYS7 404 aaPredicted RBP18.82■□□□□ 0.6
TMEM260-203ENST00000539559 OR6C2Q9NZP2 312 aa18.82■□□□□ 0.6
TMEM260-203ENST00000539559 ZNF593O00488 134 aaPredicted RBP18.81■□□□□ 0.6
TMEM260-203ENST00000539559 BHLHE40O14503 412 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 MT-ND5P03915 603 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 CA3P07451 260 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 POU2F2P09086 479 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 ADH5P11766 374 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 ZNF136P52737 540 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 BTN3A2P78410 334 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 ZNF85Q03923 595 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 TP53I3Q53FA7 332 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 MRM1Q6IN84 353 aaKnown RBP18.81■□□□□ 0.6
TMEM260-203ENST00000539559 CHMP1BQ7LBR1 199 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 KCT2Q8NC54 265 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 OR2T35Q8NGX2 323 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 COX14Q96I36 57 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 PGLYRP3Q96LB9 341 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 OR2M2Q96R28 347 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 PCBD2Q9H0N5 130 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 METTL17Q9H7H0 456 aaPredicted RBP18.81■□□□□ 0.6
TMEM260-203ENST00000539559 MRPS30Q9NP92 439 aaKnown RBP18.81■□□□□ 0.6
TMEM260-203ENST00000539559 MBNL1Q9NR56 388 aaKnown RBP18.81■□□□□ 0.6
TMEM260-203ENST00000539559 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.81■□□□□ 0.6
TMEM260-203ENST00000539559 AK6Q9Y3D8 172 aaKnown RBP18.81■□□□□ 0.6
TMEM260-203ENST00000539559 WDR45Q9Y484 360 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 GRXCR1A8MXD5 290 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 DNAJB6O75190 326 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 UBL4AP11441 157 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 RAB3BP20337 219 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 PRKAR1BP31321 381 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 TMEM255AQ5JRV8 349 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 GPR139Q6DWJ6 353 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 TMEM65Q6PI78 240 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 ZNF765Q7L2R6 523 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 GID4Q8IVV7 300 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 ZNF681Q96N22 645 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 C1QTNF2Q9BXJ5 285 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 RBCK1Q9BYM8 510 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 PRELID1Q9Y255 219 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 VCANP13611 3396 aa18.81■□□□□ 0.6
TMEM260-203ENST00000539559 PRR23AA6NEV1 266 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 GMDSO60547 372 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 RPN2P04844 631 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 P2RY2P41231 377 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 VIPR2P41587 438 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 GPM6BQ13491 265 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 ERN2Q76MJ5 926 aaKnown RBP18.8■□□□□ 0.6
TMEM260-203ENST00000539559 OR52L1Q8NGH7 329 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 CD180Q99467 661 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 ACTRT3Q9BYD9 372 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 USP36Q9P275 1121 aaKnown RBP18.8■□□□□ 0.6
TMEM260-203ENST00000539559 PRR23D1E9PI22 279 aaPredicted RBP18.8■□□□□ 0.6
TMEM260-203ENST00000539559 PLPP2O43688 288 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 PRR23D2P0DMB1 279 aaPredicted RBP18.8■□□□□ 0.6
TMEM260-203ENST00000539559 SAGP10523 405 aaPredicted RBP18.8■□□□□ 0.6
TMEM260-203ENST00000539559 BMP7P18075 431 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 M6PRP20645 277 aa18.8■□□□□ 0.6
TMEM260-203ENST00000539559 FOXK2Q01167 660 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms