RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SOX9P48436 509 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 ACTBP60709 375 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 ACTG1P63261 375 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 EIF2B1Q14232 305 aaKnown RBP13.61□□□□□ -0.23
CACNB1-206ENST00000539338 CCDC86Q9H6F5 360 aaKnown RBP13.61□□□□□ -0.23
CACNB1-206ENST00000539338 MARCH5Q9NX47 278 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 RASD1Q9Y272 281 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF443Q9Y2A4 671 aaPredicted RBP13.61□□□□□ -0.23
CACNB1-206ENST00000539338 CA5BQ9Y2D0 317 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 GON4LQ3T8J9 2241 aa13.61□□□□□ -0.23
CACNB1-206ENST00000539338 CDC14CA4D256 554 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 TAPBPO15533 448 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 PRSS3P35030 304 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 GIPRP48546 466 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 NKX3-2P78367 333 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 PGGHGQ32M88 737 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 UNQ6126/PRO20091Q6UXV3 157 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 DNAJC22Q8N4W6 341 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 KLHL15Q96M94 604 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 INSM2Q96T92 566 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 ENTPD2Q9Y5L3 495 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 BORCS7-ASMTA0A0B4J1R7 106 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 MEIOCA2RUB1 952 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 H0YIV9 168 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 SLC33A1O00400 549 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 NCR1O76036 304 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 FAM205BPQ63HN1 556 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 SHISA6Q6ZSJ9 500 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 CHTF18Q8WVB6 975 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 TWSG1Q9GZX9 223 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 MAN2C1Q9NTJ4 1040 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF226Q9NYT6 803 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 CD300AQ9UGN4 299 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 KCNS2Q9ULS6 477 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 YARS2Q9Y2Z4 477 aaKnown RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 KCNK5O95279 499 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 CXCL10P02778 98 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 SLC26A5P58743 744 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 CTBSQ01459 385 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 TLE3Q04726 772 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 CHRNEQ04844 493 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 SF3A2Q15428 464 aaKnown RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 NOXA1Q86UR1 476 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 RHOXF1Q8NHV9 184 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 NPRL2Q8WTW4 380 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 SLC38A5Q8WUX1 472 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 TANKQ92844 425 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 LPAR4Q99677 370 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 VDAC3Q9Y277 283 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 CLDN24A6NM45 220 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 ARPC5O15511 151 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 SYT7O43581 403 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 CD46P15529 392 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 ID4P47928 161 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 PRDX1Q06830 199 aaKnown RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 GNMTQ14749 295 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 DEFB133Q30KQ1 61 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 IL20RBQ6UXL0 311 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 LILRA3Q8N6C8 439 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 NINJ1Q92982 152 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 UCN3Q969E3 161 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 TM7SF3Q9NS93 570 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 HS3ST2Q9Y278 367 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 AP1M2Q9Y6Q5 423 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 R4GN57 208 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 SLC9B1P1A6NJY1 282 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 AIFM1O95831 613 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 TFP02787 698 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 TRA2BP62995 288 aaKnown RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 DLX2Q07687 328 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 TBPL2Q6SJ96 375 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 CYP4V2Q6ZWL3 525 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 ZSCAN4Q8NAM6 433 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 BMFQ96LC9 184 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 FOXN4Q96NZ1 517 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 PITHD1Q9GZP4 211 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-206ENST00000539338 ZNF442Q9H7R0 627 aa13.6□□□□□ -0.23
CACNB1-206ENST00000539338 PRSS38A1L453 326 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 SFTPDP35247 375 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 MLLT11Q13015 90 aaPredicted RBP13.59□□□□□ -0.23
CACNB1-206ENST00000539338 SERTAD2Q14140 314 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 OR1Q1Q15612 314 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 COX20Q5RI15 118 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 ALDH16A1Q8IZ83 802 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 DDIT4LQ96D03 193 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 C16orf58Q96GQ5 468 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 RNF215Q9Y6U7 377 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 FOXE1O00358 373 aaPredicted RBP13.59□□□□□ -0.23
CACNB1-206ENST00000539338 ARPC1BO15143 372 aaKnown RBP13.59□□□□□ -0.23
CACNB1-206ENST00000539338 ACP2P11117 423 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 AGTR1P30556 359 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 XCR1P46094 333 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 FGL1Q08830 312 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 MBTPS1Q14703 1052 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 C3orf38Q5JPI3 329 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 B3GLCTQ6Y288 498 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 TRIM46Q7Z4K8 759 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 COMMD7Q86VX2 200 aa13.59□□□□□ -0.23
CACNB1-206ENST00000539338 PPP1R3BQ86XI6 285 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms