RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 MAGEA2P43356 314 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PTDSS1P48651 473 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CXADRP78310 365 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ALDH6A1Q02252 535 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF117Q03924 483 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 EPS8Q12929 822 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TUBA3CQ13748 450 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TAF11Q15544 211 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CD226Q15762 336 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 EXOC3L2Q2M3D2 409 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ALG10BQ5I7T1 473 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 BICRALQ6AI39 1079 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SPINK14Q6IE38 97 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TUBA3EQ6PEY2 450 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ULK3Q6PHR2 472 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 LYPD8Q6UX82 237 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 LINC00471Q8N535 108 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TMEM178AQ8NBL3 297 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PSD4Q8NDX1 1056 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 FDCSPQ8NFU4 85 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MAGEE2Q8TD90 523 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ADAMTS16Q8TE57 1224 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DNAJA4Q8WW22 397 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZCCHC14Q8WYQ9 949 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PSMF1Q92530 271 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF597Q96LX8 424 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 EPYCQ99645 322 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ANGPTL4Q9BY76 406 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NMNAT1Q9HAN9 279 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CPNE5Q9HCH3 593 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 EXOSC3Q9NQT5 275 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SERINC1Q9NRX5 453 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TAS2R10Q9NYW0 307 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DKK4Q9UBT3 224 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OAZ3Q9UMX2 235 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NTNG1Q9Y2I2 539 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 RAXQ9Y2V3 346 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 KLF13Q9Y2Y9 288 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 KCNMB2Q9Y691 235 aa9.74□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ANKUB1A6NFN9 424 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 FAAHO00519 579 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 THRBP10828 461 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PNMTP11086 282 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HTR3AP46098 478 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TPD52P55327 224 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SUMO3P55854 103 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SOX8P57073 446 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GPR85P60893 370 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MERTKQ12866 999 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GK3PQ14409 553 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 QPRTQ15274 297 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF468Q5VIY5 522 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 AP1ARQ63HQ0 302 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SLC25A25Q6KCM7 469 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HMBOX1Q6NT76 420 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF613Q6PF04 617 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 BORAQ6PGQ7 559 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SHQ1Q6PI26 577 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 UNQ6494/PRO21346Q6UXR6 183 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 APOOLQ6UXV4 268 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GDF7Q7Z4P5 450 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PLCZ1Q86YW0 608 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 APLFQ8IW19 511 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 LILRA2Q8N149 483 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ARMC10Q8N2F6 343 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ATP6V1C2Q8NEY4 427 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR10G2Q8NGC3 310 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR4D11Q8NGI4 311 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PIGXQ8TBF5 258 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PAQR8Q8TEZ7 354 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NRBF2Q96F24 287 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HS6ST2Q96MM7 605 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CNTNAP3BQ96NU0 1288 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 RBM4BQ9BQ04 359 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 FAM173AQ9BQD7 235 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 RBM4Q9BWF3 364 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CNTNAP3Q9BZ76 1288 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 C8orf4Q9NR00 106 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CNOT11Q9UKZ1 510 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 VDAC3Q9Y277 283 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MED31Q9Y3C7 131 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CHCHD2Q9Y6H1 151 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 APC2O95996 2303 aa9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TPRP12270 2363 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-211ENST00000538363 A0A1B0GWA3 101 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PDLIM1O00151 329 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OIP5O43482 229 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PEX1O43933 1283 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CBR3O75828 277 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 EPPINO95925 133 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SP1P08047 785 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 C1QTNF9P0C862 333 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TFPIP10646 304 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ANXA8P13928 327 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HK1P19367 917 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PRKACGP22612 351 aa9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ELAVL4P26378 380 aaKnown RBP9.72□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GDF1P27539 372 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms