RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZNF322Q6U7Q0 402 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 LINC00114Q6XXX2 140 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 MEPCEQ7L2J0 689 aaKnown RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 OR51G2Q8NGK0 314 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 SPRYD4Q8WW59 207 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 HTRA1Q92743 480 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 PTP4A1Q93096 173 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 DGAT2Q96PD7 388 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 DCLRE1CQ96SD1 692 aaKnown RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 KATNB1Q9BVA0 655 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-208ENST00000538333 MIR1-1HGQ9H1L0 117 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 PLCL2Q9UPR0 1127 aa12.93□□□□□ -0.34
LIMK1-208ENST00000538333 TRAV27A0A087WT01 109 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 IGHV5-51A0A0C4DH38 117 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 ZC3H12DA2A288 527 aaKnown RBP12.92□□□□□ -0.34
LIMK1-208ENST00000538333 CLDN4O14493 209 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF749O43361 778 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 GAAP10253 952 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 SPNP16150 400 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 MAOAP21397 527 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 TMPRSS11AQ6ZMR5 421 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 C16orf52Q8NHV5 167 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 TRIM2Q9C040 744 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 MIXL1Q9H2W2 232 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.92□□□□□ -0.34
LIMK1-208ENST00000538333 CMAHPQ9Y471 501 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 CEP192Q8TEP8 1941 aa12.92□□□□□ -0.34
LIMK1-208ENST00000538333 CCDC182A6NF36 153 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 TLCD2A6NGC4 264 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 HCN1O60741 890 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 CLPSP04118 112 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 CELP19835 753 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ATP6V1E1P36543 226 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 MLLT3P42568 568 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-208ENST00000538333 HSD17B7P56937 341 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 RACK1P63244 317 aaKnown RBP12.91□□□□□ -0.34
LIMK1-208ENST00000538333 DBPQ10586 325 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ALG10BQ5I7T1 473 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ACBD7Q8N6N7 88 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF615Q8N8J6 731 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 FAM181AQ8N9Y4 354 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 SLC37A3Q8NCC5 494 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 OTULINQ96BN8 352 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ITPKCQ96DU7 683 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 MMABQ96EY8 250 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-208ENST00000538333 COQ7Q99807 217 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 IFT27Q9BW83 186 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 CHRNA10Q9GZZ6 450 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 Q9N2J8 555 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 C14orf119Q9NWQ9 140 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 MUTYHQ9UIF7 546 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ERVK-19Q9WJR5 959 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 GSTK1Q9Y2Q3 226 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 FITM1A5D6W6 292 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 FAM86C2PA6NEL3 165 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 C12orf71A8MTZ7 269 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 IL9P15248 144 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 SLC2A5P22732 501 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ATP12AP54707 1039 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 BDH1Q02338 343 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ZMAT1Q5H9K5 638 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ARMC4Q5T2S8 1044 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 METTL27Q8N6F8 245 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-208ENST00000538333 TMEM99Q8N816 258 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ZSCAN1Q8NBB4 408 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 OR51A7Q8NH64 312 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 NACC2Q96BF6 587 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF578Q96N58 590 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-208ENST00000538333 TGM7Q96PF1 710 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 G6PC3Q9BUM1 346 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 OR10A5Q9H207 317 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 UBE2ZQ9H832 354 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ISG20L2Q9H9L3 353 aaKnown RBP12.91□□□□□ -0.34
LIMK1-208ENST00000538333 SLC35A3Q9Y2D2 325 aa12.91□□□□□ -0.34
LIMK1-208ENST00000538333 ABCA7Q8IZY2 2146 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 TP53BP1Q12888 1972 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-208ENST00000538333 HYAL3O43820 417 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-208ENST00000538333 PAICSP22234 425 aaKnown RBP12.9□□□□□ -0.34
LIMK1-208ENST00000538333 NOS3P29474 1203 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 NNATQ16517 81 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 ZSWIM7Q19AV6 140 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 GLYR1Q49A26 553 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-208ENST00000538333 OGFOD3Q6PK18 319 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 KIRREL2Q6UWL6 708 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 ZNF550Q7Z398 422 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 KLBQ86Z14 1044 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 BCORP1Q8N888 145 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 CADM4Q8NFZ8 388 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 OR51Q1Q8NH59 317 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 DNAJA4Q8WW22 397 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-208ENST00000538333 SRRQ9GZT4 340 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 MCCC2Q9HCC0 563 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 ABCB9Q9NP78 766 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 ASB6Q9NWX5 421 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 LRIT1Q9P2V4 623 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 TBC1D24Q9ULP9 559 aa12.9□□□□□ -0.34
LIMK1-208ENST00000538333 SLC22A31A6NKX4 558 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms