RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CXCR4P61073 352 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 UPP1Q16831 310 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 B3GNT9Q6UX72 402 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 NECAP1Q8NC96 275 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 DUS3LQ96G46 650 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 PGAM5Q96HS1 289 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 C20orf85Q9H1P6 137 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 C2orf42Q9NWW7 574 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 COL11A1P12107 1806 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 C17orf113A0A1B0GUU1 675 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SLC22A23A1A5C7 686 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 J3QR89 54 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 KCNK5O95279 499 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SNCAP37840 140 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 MRPL19P49406 292 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TCEAL1Q15170 157 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 GLCCI1Q86VQ1 547 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 UBAC2Q8NBM4 344 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 CPNE7Q9UBL6 633 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 MTMR11A4FU01 709 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM88BA6NKF7 163 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ANHXE9PGG2 379 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 DPM1O60762 260 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 KLF8O95600 359 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ASGR1P07306 291 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF25P17030 456 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 CALCRP30988 508 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ACVRL1P37023 503 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 RCAN2Q14206 197 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 PDGFRLQ15198 375 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 DHCR24Q15392 516 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SOWAHCQ53LP3 525 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ZBTB37Q5TC79 503 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 FIP1L1Q6UN15 594 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 B3GLCTQ6Y288 498 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SLC16A13Q7RTY0 426 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 DGAT2Q96PD7 388 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SLC2A13Q96QE2 648 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 PDCD1LG2Q9BQ51 273 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM14AQ9Y6G1 99 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 PTPRUQ92729 1446 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 CYB5BO43169 146 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 NPBWR1P48145 328 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 PREPP48147 710 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 MRPS10P82664 201 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 NBPF12Q5TAG4 269 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 Q6ZPB1 254 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 C6orf120Q7Z4R8 191 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SULF2Q8IWU5 870 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 OR5AK2Q8NH90 309 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SEC22AQ96IW7 307 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 OR7D2Q96RA2 312 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 AKIP1Q9NQ31 210 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 GAR1Q9NY12 217 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SCAMP2O15127 329 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 CLEC2LP0C7M8 214 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ETV6P41212 452 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 CARD18P57730 90 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 H3F3AP84243 136 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 CATSPEREQ5SY80 951 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 MCATQ8IVS2 390 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 CYB561A3Q8NBI2 242 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 PITX2Q99697 317 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 NXF2Q9GZY0 626 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 OSBPL2Q9H1P3 480 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SRA1Q9HD15 236 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SPATA31A3Q5VYP0 1347 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 B4DXG7 233 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 MTX2O75431 263 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 HNRNPA3P51991 378 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TEKQ02763 1124 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ACSM3Q53FZ2 586 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 FBXW5Q969U6 566 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM43Q9BTV4 400 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 LIPT1Q9Y234 373 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ENPP4Q9Y6X5 453 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3DA0A087WVF3 549 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3IA0A087WXS9 549 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3EA0A087X179 549 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3KA0A087X1G2 549 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3FA6NER0 549 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3LB9A6J9 549 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TMX2-CTNND1H3BSU7 103 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ANKRD28O15084 1053 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 B4GALT2O60909 372 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 POP4O95707 220 aaKnown RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3HP0C7X1 549 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SLC22A6Q4U2R8 563 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3GQ6DHY5 549 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3CQ6IPX1 549 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TBC1D3Q8IZP1 549 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM102Q8N9M5 508 aaPredicted RBP5.34□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF610Q8N9Z0 462 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SUN3Q8TAQ9 357 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 GPR119Q8TDV5 335 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 GPR78Q96P69 363 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SLC2A9Q9NRM0 540 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 SLC7A11Q9UPY5 501 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 CSNK1G3Q9Y6M4 447 aa5.34□□□□□ -1.55
CSMD1-215ENST00000537824 PIGBOS1A0A0B4J2F0 54 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms