RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 SARGQ9BW04 601 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 C1QTNF7Q9BXJ2 289 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 MTIF3Q9H2K0 278 aaKnown RBP11.28□□□□□ -0.6
CPSF7-218ENST00000537641 MTHFD2LQ9H903 347 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-218ENST00000537641 PLEKHA1Q9HB21 404 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 AKAP7Q9P0M2 348 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-218ENST00000537641 NTMQ9P121 344 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 ATG4BQ9Y4P1 393 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 MAB21L2Q9Y586 359 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 ZNF780BQ9Y6R6 833 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 HEATR5BQ9P2D3 2071 aa11.28□□□□□ -0.6
CPSF7-218ENST00000537641 TBC1D3KA0A087X1G2 549 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 LOC105369274A0A096LPK9 316 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 TBC1D3BA6NDS4 549 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 TBC1D3FA6NER0 549 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-218ENST00000537641 NAP1L6A6NFF2 107 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 TMEM127O75204 238 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ARL6IP5O75915 188 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 CD1AP06126 327 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 SBK2P0C263 348 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 TYRP1P17643 537 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 TBXA2RP21731 343 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 BMP8BP34820 402 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 RAB28P51157 221 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ZNF136P52737 540 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 RPS7P62081 194 aaKnown RBP11.27□□□□□ -0.61
CPSF7-218ENST00000537641 DGCR2P98153 550 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 DHODHQ02127 395 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ZNF85Q03923 595 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 SLC3A1Q07837 685 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 PUDPQ08623 228 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 POU4F2Q12837 409 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 FGFBP1Q14512 234 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 PDGFRLQ15198 375 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ZNF750Q32MQ0 723 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ARHGAP11BQ3KRB8 267 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ACSM3Q53FZ2 586 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 GARNL3Q5VVW2 1013 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 TBC1D3GQ6DHY5 549 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 BMP8AQ7Z5Y6 402 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 OR4N4Q8N0Y3 316 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 SLC43A2Q8N370 569 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 C12orf76Q8N812 135 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-218ENST00000537641 OR9A2Q8NGT5 310 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 OR2A1Q8NGT9 310 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 OR2L8Q8NGY9 312 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 SMIM4Q8WVI0 70 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 RAB7BQ96AH8 199 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ZG16BQ96DA0 208 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 SLC35A4Q96G79 324 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ERMAPQ96PL5 475 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-218ENST00000537641 FERD3LQ96RJ6 166 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 DPH1Q9BZG8 443 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ZNF436Q9C0F3 470 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-218ENST00000537641 EQTNQ9NQ60 294 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 KLHL1Q9NR64 748 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 SIDT1Q9NXL6 827 aaKnown RBP11.27□□□□□ -0.61
CPSF7-218ENST00000537641 HAO2Q9NYQ3 351 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 KIF25Q9UIL4 384 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 ZMIZ1Q9ULJ6 1067 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 SPATA2Q9UM82 520 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 BAIAP2Q9UQB8 552 aa11.27□□□□□ -0.61
CPSF7-218ENST00000537641 OTOL1A6NHN0 477 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-218ENST00000537641 C1QTNF3-AMACRE9PGA6 284 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 E9PI62 339 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 KHNYNO15037 678 aaKnown RBP11.26□□□□□ -0.61
CPSF7-218ENST00000537641 SSNA1O43805 119 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 PEX14O75381 377 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 MPC2O95563 127 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 TGM6O95932 706 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 C8orf89P0DMQ9 161 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 SLC2A5P22732 501 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 LCN1P31025 176 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 FXYD6P3P58550 94 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 EEF1A1P68104 462 aaKnown RBP11.26□□□□□ -0.61
CPSF7-218ENST00000537641 CDK3Q00526 305 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 E2F1Q01094 437 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 GAS6Q14393 721 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 FAM27D1Q5T7N8 215 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 C18orf63Q68DL7 685 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 MFSD12Q6NUT3 480 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 SEZ6L2Q6UXD5 910 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 OVCH1Q7RTY7 1134 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 FAM20CQ8IXL6 584 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 DTX3Q8N9I9 347 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 UXS1Q8NBZ7 420 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 FAM98AQ8NCA5 519 aaKnown RBP11.26□□□□□ -0.61
CPSF7-218ENST00000537641 FAM71CQ8NEG0 241 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 SUSD6Q92537 303 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 NACC2Q96BF6 587 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 C4orf36Q96KX1 117 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 RBP7Q96R05 134 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 TEAD3Q99594 435 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 TRMT61BQ9BVS5 477 aaKnown RBP11.26□□□□□ -0.61
CPSF7-218ENST00000537641 HDAC8Q9BY41 377 aa11.26□□□□□ -0.61
CPSF7-218ENST00000537641 SPRTNQ9H040 489 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-218ENST00000537641 C20orf85Q9H1P6 137 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms