RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 A6NIN4 97 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 INMT-MINDY4F8WBC2 141 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 J3QLW9 94 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 PLPP2O43688 288 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 RFPL3O75679 317 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 PAHP00439 452 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ATP1B1P05026 303 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 SBK2P0C263 348 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 IL9P15248 144 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ZNF19P17023 458 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 NTSR1P30989 418 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 TALDO1P37837 337 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 GZMKP49863 264 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 RAB25P57735 213 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 PLAURQ03405 335 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 NFATC4Q14934 902 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 THOC7Q6I9Y2 204 aaKnown RBP13.25□□□□□ -0.29
USP44-203ENST00000537435 SFXN4Q6P4A7 337 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 PARM1Q6UWI2 310 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ASB18Q6ZVZ8 466 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 SAMD12Q8N8I0 201 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 CYB561A3Q8NBI2 242 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 OR5T3Q8NGG3 340 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 GRHL3Q8TE85 626 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 FGF14Q92915 247 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 C4orf36Q96KX1 117 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 STACQ99469 402 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 RPRD1BQ9NQG5 326 aaKnown RBP13.25□□□□□ -0.29
USP44-203ENST00000537435 ACOXLQ9NUZ1 547 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 FBXL4Q9UKA2 621 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 TMEM5Q9Y2B1 443 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 UNC80Q8N2C7 3258 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 OR6C74A6NCV1 312 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 PLOD3O60568 738 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 FMO6PO60774 539 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 RASGRP1O95267 797 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 CT62P0C5K7 136 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 COL9A1P20849 921 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 GABRA3P34903 492 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 RFX3P48380 749 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 RRAS2P62070 204 aaPredicted RBP13.25□□□□□ -0.29
USP44-203ENST00000537435 SHC2P98077 582 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ZNF85Q03923 595 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 CRMP1Q14194 572 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 GPR176Q14439 515 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 RPTNQ6XPR3 784 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 CEACAM19Q7Z692 300 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ZAR1Q86SH2 424 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 LIX1LQ8IVB5 337 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 GPALPP1Q8IXQ4 340 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 C17orf47Q8NEP4 570 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ABHD4Q8TB40 342 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ZFAND1Q8TCF1 268 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 KCTD12Q96CX2 325 aaKnown RBP13.25□□□□□ -0.29
USP44-203ENST00000537435 MYADMQ96S97 322 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ZFYVE21Q9BQ24 234 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ADGRL4Q9HBW9 690 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 GALNT9Q9HCQ5 603 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 LYRM4Q9HD34 91 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 MCUBQ9NWR8 336 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 ING3Q9NXR8 418 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 USP36Q9P275 1121 aaKnown RBP13.25□□□□□ -0.29
USP44-203ENST00000537435 PCOLCE2Q9UKZ9 415 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 SLC35A3Q9Y2D2 325 aa13.25□□□□□ -0.29
USP44-203ENST00000537435 RIIAD1A6NNX1 92 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 H0YGG7 62 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 CPNE3O75131 537 aaKnown RBP13.24□□□□□ -0.29
USP44-203ENST00000537435 PPP1R3DO95685 299 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 TFPIP10646 304 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 PVRP15151 417 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 CD53P19397 219 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 ACVR1BP36896 505 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 TNFRSF4P43489 277 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 OR12D2P58182 307 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 ARF3P61204 181 aaPredicted RBP13.24□□□□□ -0.29
USP44-203ENST00000537435 POU6F2P78424 691 aaPredicted RBP13.24□□□□□ -0.29
USP44-203ENST00000537435 PRICKLE4Q2TBC4 344 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 OR4C6Q8NH72 309 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 SMPDL3BQ92485 455 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 FAM3CQ92520 227 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 RERGQ96A58 199 aaPredicted RBP13.24□□□□□ -0.29
USP44-203ENST00000537435 RFT1Q96AA3 541 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 WDR92Q96MX6 357 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 THAP7Q9BT49 309 aaPredicted RBP13.24□□□□□ -0.29
USP44-203ENST00000537435 TMEM27Q9HBJ8 222 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 CAPN10Q9HC96 672 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 KLHL1Q9NR64 748 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 MAT2BQ9NZL9 334 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 BRINP1O60477 761 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 PTP4A3O75365 173 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 GPR75O95800 540 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 C1QBP02746 253 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 GYPBP06028 91 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 HOXC4P09017 264 aaPredicted RBP13.24□□□□□ -0.29
USP44-203ENST00000537435 SLC2A5P22732 501 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 ATP12AP54707 1039 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 GPR18Q14330 331 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 OAFQ86UD1 273 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 ZNF614Q8N883 585 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms