RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	CABYR	O75952	493 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	IL1B	P01584	269 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	PRKAR2B	P31323	418 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	UGT1A3	P35503	534 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	P2RY1	P47900	373 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	EFNA3	P52797	238 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	DSCR10	P59022	87 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	KRTAP10-9	P60411	292 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	LMO4	P61968	165 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	MRPS11	P82912	194 aa	Known RBP	4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	BCL2L1	Q07817	233 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	SLC10A7	Q0GE19	358 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	ZMYND11	Q15326	602 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	TRIM16L	Q309B1	348 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	CEP55	Q53EZ4	464 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	SLC25A30	Q5SVS4	291 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	OLFML2A	Q68BL7	652 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	TPGS2	Q68CL5	300 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	VIT	Q6UXI7	678 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	MARCH9	Q86YJ5	346 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	CCDC50	Q8IVM0	306 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	PIGC	Q92535	297 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	RPRD1A	Q96P16	312 aa	Predicted RBP	4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	CITED1	Q99966	193 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	TUBGCP2	Q9BSJ2	902 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	SIGLEC8	Q9NYZ4	499 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	MEMO1	Q9Y316	297 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	IKBKG	Q9Y6K9	419 aa		4.08	□□□□□ -1.76
PRKDC-208	ENST00000536710	PP2D1	A8MPX8	630 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	SULT2B1	O00204	365 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	SURF6	O75683	361 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	DBT	P11182	482 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	CCDC130	P13994	396 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	CYP2B6	P20813	491 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	MMP11	P24347	488 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	FAS	P25445	335 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	HMGB2	P26583	209 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	HOXD10	P28358	340 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	CD80	P33681	288 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	STAR	P49675	285 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	HSPA2	P54652	639 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	RPS8	P62241	208 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	NCBP1	Q09161	790 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	KRTAP27-1	Q3LI81	207 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	SLC25A52	Q3SY17	297 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	FBXL22	Q6P050	247 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710		Q6ZPB1	254 aa	Predicted RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	SLC35F2	Q8IXU6	374 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	GPD1L	Q8N335	351 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	N4BP2L2	Q92802	583 aa	Predicted RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	BAD	Q92934	168 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	RBM14	Q96PK6	669 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	SECISBP2	Q96T21	854 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	ZBTB18	Q99592	522 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	PYGO2	Q9BRQ0	406 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	TMEM43	Q9BTV4	400 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	GON7	Q9BXV9	100 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	NAT10	Q9H0A0	1025 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	ZNF385D	Q9H6B1	395 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	FANCF	Q9NPI8	374 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR1A1	Q9P1Q5	309 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	CDH9	Q9ULB4	789 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	PDE10A	Q9Y233	779 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	PLLP	Q9Y342	182 aa		4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	AK6	Q9Y3D8	172 aa	Known RBP	4.07	□□□□□ -1.76
PRKDC-208	ENST00000536710	IGLV8-61	A0A075B6I0	122 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710		A0A1W2PQ72	361 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	PCP4L1	A6NKN8	68 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710		E7ESA3	106 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	POLR2D	O15514	142 aa	Known RBP	4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	PRKY	O43930	277 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	GNA14	O95837	355 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	POLR2E	P19388	210 aa	Known RBP	4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	IMPDH1	P20839	514 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	FGF9	P31371	208 aa	Predicted RBP	4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	YWHAB	P31946	246 aa	Known RBP	4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR3A4P	P47883	348 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	PRKX	P51817	358 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	RIPK4	P57078	832 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	BEND3	Q5T5X7	828 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	METTL11B	Q5VVY1	283 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	MOB1B	Q7L9L4	216 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	NRM	Q8IXM6	262 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	BHLHE23	Q8NDY6	225 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR4D9	Q8NGE8	314 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	OR2A12	Q8NGT7	310 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	TCTEX1D2	Q8WW35	142 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	RAPGEF5	Q92565	580 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	SLC25A38	Q96DW6	304 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	VSIG2	Q96IQ7	327 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	SERAC1	Q96JX3	654 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	DEFB126	Q9BYW3	111 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	CHIA	Q9BZP6	476 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	MAGT1	Q9H0U3	335 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	RHBG	Q9H310	441 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	LRRN3	Q9H3W5	708 aa		4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.06	□□□□□ -1.76
PRKDC-208	ENST00000536710	WARS2	Q9UGM6	360 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms