RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 NPIPA5A0A0B4J1W7 369 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 SERINC4A6NH21 518 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 NPIPA7E9PJI5 369 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 TM9SF1O15321 606 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 RGS16O15492 202 aaPredicted RBP11.7□□□□□ -0.54
RTN3-207ENST00000536011 THBDP07204 575 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 YES1P07947 543 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 NPIPA8P0DM63 369 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 MATN1P21941 496 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 IL32P24001 234 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 ARRB2P32121 409 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 ETV4P43268 484 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 LTBQ06643 244 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 P2RY6Q15077 328 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 QPRTQ15274 297 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 PDCD2Q16342 344 aaPredicted RBP11.7□□□□□ -0.54
RTN3-207ENST00000536011 DPY19L1Q2PZI1 675 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 TMEM176BQ3YBM2 270 aaPredicted RBP11.7□□□□□ -0.54
RTN3-207ENST00000536011 SLC25A53Q5H9E4 307 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.7□□□□□ -0.54
RTN3-207ENST00000536011 ANXA8L1Q5VT79 327 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 EIF3MQ7L2H7 374 aaKnown RBP11.7□□□□□ -0.54
RTN3-207ENST00000536011 SSX8Q7RTT4 187 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 C6orf120Q7Z4R8 191 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 YTHDF3Q7Z739 585 aaKnown RBP11.7□□□□□ -0.54
RTN3-207ENST00000536011 LRRC34Q8IZ02 419 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 MREGQ8N565 214 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 OR8J2Q8NGG1 315 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 OR5D16Q8NGK9 328 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 RFWD2Q8NHY2 731 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 GPR119Q8TDV5 335 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 ABHD3Q8WU67 409 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 TMEM234Q8WY98 164 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 ROBO4Q8WZ75 1007 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 ST8SIA1Q92185 356 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 PLPPR2Q96GM1 343 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 SDF2Q99470 211 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 DPY30Q9C005 99 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 SSU72Q9NP77 194 aaKnown RBP11.7□□□□□ -0.54
RTN3-207ENST00000536011 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.7□□□□□ -0.54
RTN3-207ENST00000536011 RAP2CQ9Y3L5 183 aa11.7□□□□□ -0.54
RTN3-207ENST00000536011 SPIN1Q9Y657 262 aaPredicted RBP11.7□□□□□ -0.54
RTN3-207ENST00000536011 ETV2O00321 342 aaPredicted RBP11.69□□□□□ -0.54
RTN3-207ENST00000536011 KLF4O43474 513 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 OIP5O43482 229 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 NTN1O95631 604 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 CSTAP01040 98 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 HEXAP06865 529 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 PGCP20142 388 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 LOXP28300 417 aaPredicted RBP11.69□□□□□ -0.54
RTN3-207ENST00000536011 SHC1P29353 583 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 CLNS1AP54105 237 aaKnown RBP11.69□□□□□ -0.54
RTN3-207ENST00000536011 RAC3P60763 192 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 ABCE1P61221 599 aaKnown RBP11.69□□□□□ -0.54
RTN3-207ENST00000536011 HPCAP84074 193 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 GPR68Q15743 365 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 CHI3L2Q15782 390 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 ZNF141Q15928 474 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 ARHGAP11BQ3KRB8 267 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 PDZK1Q5T2W1 519 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 TFAP2EQ6VUC0 442 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 GABRG1Q8N1C3 465 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 ATP6V1C2Q8NEY4 427 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 OR4A15Q8NGL6 344 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 MIPOL1Q8TD10 442 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 SLC25A43Q8WUT9 341 aaPredicted RBP11.69□□□□□ -0.54
RTN3-207ENST00000536011 KISS1RQ969F8 398 aaPredicted RBP11.69□□□□□ -0.54
RTN3-207ENST00000536011 S100PBPQ96BU1 408 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 COX4I2Q96KJ9 171 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 Q96MF0 132 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 SRXN1Q9BYN0 137 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 LAT2Q9GZY6 243 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 ESRP2Q9H6T0 727 aaKnown RBP11.69□□□□□ -0.54
RTN3-207ENST00000536011 AKTIPQ9H8T0 292 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 POLE3Q9NRF9 147 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 SLC35A3Q9Y2D2 325 aa11.69□□□□□ -0.54
RTN3-207ENST00000536011 HS3ST1O14792 307 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 CYP7B1O75881 506 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 FESP07332 822 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 GUSBP08236 651 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 NID1P14543 1247 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 PAX1P15863 534 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 CREB1P16220 341 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 ENPP1P22413 925 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 PTH2RP49190 550 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 KHKP50053 298 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 RNF144AP50876 292 aaPredicted RBP11.68□□□□□ -0.54
RTN3-207ENST00000536011 RPL14P50914 215 aaKnown RBP11.68□□□□□ -0.54
RTN3-207ENST00000536011 RPS26P62854 115 aaKnown RBP11.68□□□□□ -0.54
RTN3-207ENST00000536011 CSNK2A1P68400 391 aaPredicted RBP11.68□□□□□ -0.54
RTN3-207ENST00000536011 SKP2Q13309 424 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 TOMM34Q15785 309 aaPredicted RBP11.68□□□□□ -0.54
RTN3-207ENST00000536011 NDUFAF6Q330K2 333 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 SFRP5Q5T4F7 317 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 OR4F3Q6IEY1 312 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 C22orf34Q6ZV56 151 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 CROCCP2Q86T23 111 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 TUSC5Q8IXB3 177 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 ZNF611Q8N823 705 aa11.68□□□□□ -0.54
RTN3-207ENST00000536011 ZNF781Q8N8C0 355 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms