RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 RASGEF1BQ0VAM2 473 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 QPRTQ15274 297 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 CD226Q15762 336 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 KLHL26Q53HC5 615 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 KLHL17Q6TDP4 642 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 BHLHA15Q7RTS1 189 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 GALNT5Q7Z7M9 940 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 UBE2J2Q8N2K1 259 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 TRIML2Q8N7C3 387 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 OR4A15Q8NGL6 344 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 OR5AK3PQ8NH89 298 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 OR2W6PQ8NHA6 318 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 TCP10LQ8TDR4 215 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 ST8SIA1Q92185 356 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 RADILQ96JH8 1075 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 ZIM3Q96PE6 472 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 OR5B2Q96R09 309 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 OR7D2Q96RA2 312 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 DPY30Q9C005 99 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 TUBB1Q9H4B7 451 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 TNFRSF12AQ9NP84 129 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
CLSTN3-205ENST00000535452 CIB4A0PJX0 185 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 TRIM64A6NGJ6 449 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 SERINC4A6NH21 518 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 TRIM64BA6NI03 449 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 TMEM233B4DJY2 109 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 SULT2B1O00204 365 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 SIAH2O43255 324 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 KLF4O43474 513 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 PRKCAP17252 672 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 PSMA4P25789 261 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 MERTKQ12866 999 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 CLEC12BQ2HXU8 276 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 TIGD2Q4W5G0 525 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 C6orf136Q5SQH8 315 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 TFAP2EQ6VUC0 442 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 ZCCHC23Q6ZST2 131 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 P2RY8Q86VZ1 359 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 OIT3Q8WWZ8 545 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 MECRQ9BV79 373 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 NMUR2Q9GZQ4 415 aa11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 SIRT3Q9NTG7 399 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-205ENST00000535452 NPIPA5A0A0B4J1W7 369 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 NPIPA7E9PJI5 369 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 GPR171O14626 319 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 THBDP07204 575 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 UBTFL6P0CB48 400 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 NPIPA8P0DM63 369 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 GGT1P19440 569 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 KHKP50053 298 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 CLNS1AP54105 237 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 EMX2Q04743 252 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 DMTNQ08495 405 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 PPA1Q15181 289 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 DPY19L1Q2PZI1 675 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 SMU1Q2TAY7 513 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 PDZK1Q5T2W1 519 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 EMBQ6PCB8 327 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 CBLN3Q6UW01 205 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 Q6ZT83 130 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 C6orf120Q7Z4R8 191 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 ZAR1Q86SH2 424 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 ZNF619Q8N2I2 560 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 PSMA8Q8TAA3 256 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 POC1BQ8TC44 478 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 GPR119Q8TDV5 335 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 SMAP2Q8WU79 429 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 COQ8BQ96D53 544 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 ADAD1Q96M93 576 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 THUMPD3Q9BV44 507 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 LAT2Q9GZY6 243 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 CXorf36Q9H7Y0 433 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 POLE3Q9NRF9 147 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 ICAM5Q9UMF0 924 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 MGAT4BQ9UQ53 548 aa11.79□□□□□ -0.52
CLSTN3-205ENST00000535452 CCT8L1PA6NM43 557 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 RNASET2O00584 256 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 RGS16O15492 202 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 IFNA2P01563 188 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 BPGMP07738 259 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 G6PDP11413 515 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 PAX1P15863 534 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 APOBEC1P41238 236 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 HTR3AP46098 478 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 RNF144AP50876 292 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 CLDN8P56748 225 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 TAB1Q15750 504 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 NRF1Q16656 503 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 GPAT3Q53EU6 434 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 XKR7Q5GH72 579 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 NCMAPQ5T1S8 102 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 AGAP6Q5VW22 663 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 ADAM5Q6NVV9 412 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 TMEM108Q6UXF1 575 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 KRTAP1-3Q8IUG1 177 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 GABRG1Q8N1C3 465 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 KRTCAP2Q8N6L1 136 aa11.78□□□□□ -0.52
CLSTN3-205ENST00000535452 OR5D16Q8NGK9 328 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms