RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 PRSS23O95084 383 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 OXSR1O95747 527 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-206ENST00000535290 TFP02787 698 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 SAGP10523 405 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-206ENST00000535290 ELK4P28324 431 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 CXCR5P32302 372 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 GABRA3P34903 492 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 EIF1P41567 113 aaKnown RBP7.16□□□□□ -1.26
CLIP1-206ENST00000535290 PSMD4P55036 377 aaKnown RBP7.16□□□□□ -1.26
CLIP1-206ENST00000535290 LMO4P61968 165 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 ADRM1Q16186 407 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 FRG2Q64ET8 278 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 RHOUQ7L0Q8 258 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 VASH1Q7L8A9 365 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-206ENST00000535290 GOLGA7Q7Z5G4 137 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 ZAR1Q86SH2 424 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 RELL1Q8IUW5 271 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 OR52E4Q8NGH9 312 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 NANPQ8TBE9 248 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 PIK3R3Q92569 461 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 DVL3Q92997 716 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-206ENST00000535290 APH1AQ96BI3 265 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF524Q96C55 264 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 FRG2BQ96QU4 278 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 CCT8L2Q96SF2 557 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 SENP1Q9P0U3 644 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 MALT1Q9UDY8 824 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 MRTO4Q9UKD2 239 aaKnown RBP7.16□□□□□ -1.26
CLIP1-206ENST00000535290 SLC12A4Q9UP95 1085 aa7.16□□□□□ -1.26
CLIP1-206ENST00000535290 IGKV3D-15A0A087WSY6 115 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 IGHV1-18A0A0C4DH31 117 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 TMEM129A0AVI4 362 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 UPK1AO00322 258 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 OR7A17O14581 309 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 PIN1P1O15428 100 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 OIP5O43482 229 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 COQ9O75208 318 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 PSMG1O95456 288 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 ESRRBO95718 433 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 FSHBP01225 129 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 PRB2P02812 416 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 ERCC1P07992 297 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 IL3P08700 152 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 ADRA2AP08913 450 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 OMGP23515 440 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 COL8A2P25067 703 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 FPR2P25090 351 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 GP5P40197 560 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 SLC1A3P43003 542 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 GPR6P46095 362 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 ZP4Q12836 540 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 GTF2H2Q13888 395 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 FRG1Q14331 258 aaKnown RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 CD226Q15762 336 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 TOMM34Q15785 309 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 PFKFB4Q16877 469 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 PRSS53Q2L4Q9 553 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 GLE1Q53GS7 698 aaKnown RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 ELFN2Q5R3F8 820 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 GTF2H2CQ6P1K8 395 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 TMEM107Q6UX40 140 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 RBMS3Q6XE24 437 aaKnown RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 FAM9CQ8IZT9 166 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 C1orf52Q8N6N3 182 aaKnown RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 ZNF527Q8NB42 609 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 SYT14Q8NB59 555 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 SLC16A11Q8NCK7 471 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 B4GALNT2Q8NHY0 566 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 TSPAN17Q96FV3 270 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 LMF2Q9BU23 707 aaKnown RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 TPK1Q9H3S4 243 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 SLC52A3Q9NQ40 469 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 SLC35C2Q9NQQ7 365 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 FARSBQ9NSD9 589 aaKnown RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 RNF14Q9UBS8 474 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 OPN4Q9UHM6 478 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 FBXO9Q9UK97 447 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 GUCA1BQ9UMX6 200 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 C19orf53Q9UNZ5 99 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 AMDHD2Q9Y303 409 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 NOSIPQ9Y314 301 aaKnown RBP7.15□□□□□ -1.26
CLIP1-206ENST00000535290 TEX264Q9Y6I9 313 aa7.15□□□□□ -1.26
CLIP1-206ENST00000535290 A0A087WV62 115 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 A0A0G2JMP0 313 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 A0A0X1KG70 313 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 M0QZ24 198 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 PLPP2O43688 288 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 KCNH1O95259 989 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 MPZL1O95297 269 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 H6PDO95479 791 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 RNASE1P07998 156 aaKnown RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 NGFRP08138 427 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 STMN1P16949 149 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 SLC7A1P30825 629 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 MPIP34949 423 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 ARL1P40616 181 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 RNF144AP50876 292 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 PRPS1P60891 318 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 TRA2BP62995 288 aaKnown RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 MYBPC1Q00872 1141 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms