RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	MAP3K8	P41279	467 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZNF763	Q0D2J5	394 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	BNIP1	Q12981	228 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZNHIT3	Q15649	155 aa	Predicted RBP	10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	PDCD2	Q16342	344 aa	Predicted RBP	10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	SGCB	Q16585	318 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	PRSS53	Q2L4Q9	553 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	GALNTL6	Q49A17	601 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	FAM71E1	Q6IPT2	247 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	EPGN	Q6UW88	154 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	BEND4	Q6ZU67	534 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	MARCH3	Q86UD3	253 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	TMEM171	Q8WVE6	324 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	STON2	Q8WXE9	905 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	HOXB13	Q92826	284 aa	Predicted RBP	10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	ELP4	Q96EB1	424 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	KLHL4	Q9C0H6	718 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	C3orf14	Q9HBI5	128 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	FLRT3	Q9NZU0	649 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	GPR52	Q9Y2T5	361 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	FIS1	Q9Y3D6	152 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	DSCAM	O60469	2012 aa		10.33	□□□□□ -0.76
CTNND1-238	ENST00000534647	ROS1	P08922	2347 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	GOLGA8Q	A0A0J9YX86	632 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	GOLGA8O	A6NCC3	632 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	ANKRD65	E5RJM6	399 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	GOLGA8N	F8WBI6	632 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	HS3ST1	O14792	307 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	PRODH	O43272	600 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	UTS2	O95399	124 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	ANGPTL1	O95841	491 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	CHEK2	O96017	543 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	JUN	P05412	331 aa	Known RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	FAM157B	P0CG42	384 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	NCF2	P19878	526 aa	Predicted RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	PSMB1	P20618	241 aa	Known RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	PSMA4	P25789	261 aa	Known RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	SLC6A8	P48029	635 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	HTR6	P50406	440 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	NCBP2	P52298	156 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	C2orf80	Q0P641	193 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZNF155	Q12901	538 aa	Predicted RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	LCP2	Q13094	533 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	KRT72	Q14CN4	511 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	ETFDH	Q16134	617 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	CTU2	Q2VPK5	515 aa	Known RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	METTL21C	Q5VZV1	264 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	FAM219B	Q5XKK7	198 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	FAM91A1	Q658Y4	838 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	ANKRD34A	Q69YU3	496 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	APOOL	Q6UXV4	268 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZNF704	Q6ZNC4	412 aa	Predicted RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	OR5M1	Q8NGP8	315 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	ACTRT2	Q8TDY3	377 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	NSL1	Q96IY1	281 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	METTL2A	Q96IZ6	378 aa	Known RBP	10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	ADGRG7	Q96K78	797 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	AMDHD1	Q96NU7	426 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	EBF4	Q9BQW3	602 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	CCDC28B	Q9BUN5	200 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	HDHD5	Q9BXW7	423 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	NUF2	Q9BZD4	464 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	NMUR2	Q9GZQ4	415 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	GLIPR2	Q9H4G4	154 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	MID1IP1	Q9NPA3	183 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	MYNN	Q9NPC7	610 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	TCF7L2	Q9NQB0	619 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	TRAF6	Q9Y4K3	522 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	DNHD1	Q96M86	4753 aa		10.32	□□□□□ -0.76
CTNND1-238	ENST00000534647	FBN1	P35555	2871 aa	Known RBP	10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	CFAP73	A6NFT4	308 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	OVOL3	O00110	214 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZNF195	O14628	629 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	AZIN1	O14977	448 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	SKAP2	O75563	359 aa	Predicted RBP	10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	PRKD3	O94806	890 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	KCNH1	O95259	989 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	LCN1	P31025	176 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	CTBP2	P56545	445 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	RAC1	P63000	192 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	KRTAP1-1	Q07627	177 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	STX5	Q13190	355 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	SLC9B1	Q4ZJI4	515 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	TMEM201	Q5SNT2	666 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	CPTP	Q5TA50	214 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	GTF2IRD2B	Q6EKJ0	949 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	HEPHL1	Q6MZM0	1159 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	TMEM107	Q6UX40	140 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	IKBIP	Q70UQ0	350 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	MAVS	Q7Z434	540 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	TRIM46	Q7Z4K8	759 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	GTF2IRD2	Q86UP8	949 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	OR10D3	Q8NH80	312 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZBTB8A	Q96BR9	441 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	ZNF764	Q96H86	408 aa	Predicted RBP	10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	PRRG4	Q9BZD6	226 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	TBL1XR1	Q9BZK7	514 aa		10.31	□□□□□ -0.76
CTNND1-238	ENST00000534647	MIEF1	Q9NQG6	463 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms