RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 OR9Q1Q8NGQ5 310 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 PFN4Q8NHR9 129 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 STT3BQ8TCJ2 826 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 LGALS12Q96DT0 336 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 CCDC74BQ96LY2 380 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 GFM1Q96RP9 751 aaKnown RBP12.32□□□□□ -0.44
BEST1-208ENST00000534553 UBQLN3Q9H347 655 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 C12orf10Q9HB07 376 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 HHATLQ9HCP6 504 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 H2AFY2Q9P0M6 372 aaPredicted RBP12.32□□□□□ -0.44
BEST1-208ENST00000534553 SIGLEC7Q9Y286 467 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 EXOSC1Q9Y3B2 195 aaKnown RBP12.32□□□□□ -0.44
BEST1-208ENST00000534553 ARID1BQ8NFD5 2236 aaPredicted RBP12.32□□□□□ -0.44
BEST1-208ENST00000534553 CABIN1Q9Y6J0 2220 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 A0A087WUJ7 227 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 SCG5P05408 212 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 ZGLP1P0C6A0 271 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 CDK4P11802 303 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 IL12BP29460 328 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 UGT2B10P36537 528 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 AQP6Q13520 282 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 SPCS2Q15005 226 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 SPHARQ15513 63 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 MOGQ16653 247 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 WBP2NLQ6ICG8 309 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 GDPGP1Q6ZNW5 385 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 RTL4Q6ZR62 310 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 COX15Q7KZN9 410 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 SLC34A3Q8N130 599 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 NANOGP1Q8N7R0 232 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 OR4Q3Q8NH05 313 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 TP53INP1Q96A56 240 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 EFHD2Q96C19 240 aaPredicted RBP12.32□□□□□ -0.44
BEST1-208ENST00000534553 CLIP3Q96DZ5 547 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 DTNBP1Q96EV8 351 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 SAMD8Q96LT4 415 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 GAL3ST4Q96RP7 486 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 WWTR1Q9GZV5 400 aa12.32□□□□□ -0.44
BEST1-208ENST00000534553 SPTBP11277 2137 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 TMEM129A0AVI4 362 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 TMEM221A6NGB7 291 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 A8MUA0 341 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 M0R296 226 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 ZNF264O43296 627 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 UTS2O95399 124 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 HEXBP07686 556 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 ZNF883P0CG24 379 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 FGF5P12034 268 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 MAKP20794 623 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 HTR1FP30939 366 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 PNLIPRP2P54317 469 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 CDH11P55287 796 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 MLLT11Q13015 90 aaPredicted RBP12.31□□□□□ -0.44
BEST1-208ENST00000534553 AADACL4Q5VUY2 407 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 C19orf48Q6RUI8 117 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 USP43Q70EL4 1123 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 NUP54Q7Z3B4 507 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 OAFQ86UD1 273 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 C9orf40Q8IXQ3 194 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 CADM2Q8N3J6 435 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 KBTBD8Q8NFY9 601 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 OR52I1Q8NGK6 324 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 TBC1D15Q8TC07 691 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 METTL21AQ8WXB1 218 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 ZHX1-C8orf76Q96EF9 292 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 RNFT2Q96EX2 444 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 NUDT9Q9BW91 350 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 SLC26A1Q9H2B4 701 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 SYNDIG1Q9H7V2 258 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 ISYNA1Q9NPH2 558 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 MEPEQ9NQ76 525 aaPredicted RBP12.31□□□□□ -0.44
BEST1-208ENST00000534553 CMC2Q9NRP2 79 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 CTSFQ9UBX1 484 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 ICAM5Q9UMF0 924 aa12.31□□□□□ -0.44
BEST1-208ENST00000534553 PPIEQ9UNP9 301 aaKnown RBP12.31□□□□□ -0.44
BEST1-208ENST00000534553 LSM2Q9Y333 95 aaKnown RBP12.31□□□□□ -0.44
BEST1-208ENST00000534553 GTPBP1O00178 669 aaKnown RBP12.3□□□□□ -0.44
BEST1-208ENST00000534553 BHLHE40O14503 412 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 EIF4E2O60573 245 aaKnown RBP12.3□□□□□ -0.44
BEST1-208ENST00000534553 GP1BAP07359 652 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 SLC6A6P31641 620 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 NRG3P56975 720 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 PLCXD2Q0VAA5 305 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 SKP2Q13309 424 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 ARHGAP11AQ6P4F7 1023 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 KIRREL2Q6UWL6 708 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 HSDL2Q6YN16 418 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 OVCH1Q7RTY7 1134 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 ZNF441Q8N8Z8 693 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 VMP1Q96GC9 406 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 TMEM43Q9BTV4 400 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 JAM3Q9BX67 310 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 SEMA4CQ9C0C4 833 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 LAT2Q9GZY6 243 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 PLGRKTQ9HBL7 147 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 ATP13A2Q9NQ11 1180 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 SEC14L4Q9UDX3 406 aa12.3□□□□□ -0.44
BEST1-208ENST00000534553 C19orf25Q9UFG5 118 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms